Anoplopoma fimbria (sablefish): 129099251
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Entry
129099251 CDS
T09102
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129099251 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129099251 (mmp2)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
129099251 (mmp2)
Peptidases and inhibitors [BR:
afb01002
]
Metallo peptidases
Family M10
129099251 (mmp2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
129099251
NCBI-ProteinID:
XP_054464395
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All DBs
Position
2:10760407..10775812
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AA seq
658 aa
AA seq
DB search
MGFPSIFSCRRMVLKVFIVQFIAFQATYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDITYRILGYSPDLDEEVINDAFFRAFKVWSDVTPLSFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKYGNADGEFCKFPFMF
MGTEYNSCTAQGRDDGFLWCSTSYNFDEDGKYGFCPHELLFTIGGNGEGAACKFPFTFLG
EKYDGCTTQGRDDGYRWCATTEDYDQDSSFGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YEACTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPVYTFTKDFRLPDDDIRGIQDLYGVPTDKPLPPTQGPVTPMDICKEPVVFDAVAQIR
GETFFFKDRFLFRSVNFRGKPNGPMLVATYWPDLPAKIDAAYEIPAEEKSVFFSGNEMWV
YKADQLERGYPKRLSSLELPNDLQKIDAAFNFRKNRKTYFFAGDKFWRYNEDMKTMDPGF
PKLIADSWNGIPDEIDSSFSLNGIDYSYFFKGNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgtcgatatttagctgtcgtcggatggttctcaaagtctttattgttcag
ttcatcgccttccaagcaacttatgctgccccctcgcctattatcaggtttcctggagac
gacactactccaaaaacagacaaagaagttgctctgcactatctgaataagttttatgga
tgcccacaagacagatgtaaccttatggtgctcaaggacaccctgaagaaaatgcaaaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccatgtgg
cagaagaaagacatcacttacagaatcctaggatactctcctgacctggatgaggaagtc
ataaatgatgctttcttcagagccttcaaagtatggagtgacgtcaccccactctcattc
acccgtctcatggacggcgaggctgacatcatgattaactttggacgcaatgagcacgga
gacggttacccctttgacgggaaagatggcctcctggctcatgcctttgcaccagggcca
ggaattgggggagactcacattttgatgatgatgagcagtggacgctgggagatggccaa
gtggtgaaggtgaagtatggcaatgctgatggggagttctgtaaattccccttcatgttc
atgggcactgagtacaacagctgtacagctcagggccgtgacgacggcttcctgtggtgc
tcaaccagctacaactttgatgaagacggcaaatatggcttctgcccccatgaattactt
ttcaccattggtggaaacggagagggcgctgcatgtaaattccccttcacctttttggga
gagaagtatgacggatgcaccactcaaggcagggatgatggttaccgctggtgtgccacc
actgaggactatgaccaggactcatctttcgggttctgccctgaaactgccatgtcgaca
gtgggaggaaattcagaggggagcccctgtgtcttccccttcaccttcttgggtgacacc
tacgaggcctgtacctcatctggacgcagcgatggcaagatgtggtgcgcttccaccaag
agctatgatgatgaccgcaaatggggtttctgtccagaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgcccttggtttggagcactctcaggaccccggagca
ttgatggcccccgtttacactttcactaaagacttcagacttcctgatgatgacatcaga
ggcatccaggacctctatggtgtgccaacagacaagcctttgcctccaacccagggtcca
gtcactccaatggacatctgtaaagagccagttgtgtttgacgctgtagcccagatcaga
ggagagactttcttcttcaaggacaggttcctgttcaggtcagtcaatttcagaggcaag
cccaatggccccatgctggtggccacctactggccagacctgcctgccaaaatagacgct
gcctatgaaattccagcggaggaaaaatctgtcttcttctcaggcaacgagatgtgggtc
tacaaagcagatcagttggagagaggctatccaaagagactctccagccttgaactaccc
aatgatctgcagaaaatcgatgctgccttcaactttaggaagaacaggaagacttacttc
tttgctggggacaaattctggagatacaatgaagatatgaagacaatggaccctggcttc
cccaaacttattgcagattcctggaatggcatcccagatgaaatagactcttccttcagt
ctcaatggcattgattacagctacttcttcaaaggcaaccactatttcaaactggaagac
agcagcttgaagattgttaaattgggtgaaatcacgaaggattggctcggttgttga
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