Anoplopoma fimbria (sablefish): 129099910
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Entry
129099910 CDS
T09102
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129099910 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129099910 (nup210)
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129099910 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_6th
Ig_NUP210_4th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
129099910
NCBI-ProteinID:
XP_054465320
LinkDB
All DBs
Position
12:complement(22687627..22716154)
Genome browser
AA seq
1879 aa
AA seq
DB search
MMSVRLSVVALLLLSVHGYSKLNIPKVLLPLARSTRINFTLETTEGCYRWSTTRPEVASI
QAVDEESGRGCSRKAVLQARSTHPSRLTSIILAEDVVTGQVLRCDAIVDIISEIQIVSTT
RELHLEDSPLALKIHALDSEGNTFSTLAGLVFDWTLVKDVDVNGFSDSYNALRVLKFSES
TYTPPGYISEMERVGKQGDMILVSGQKTGHAKLKAKLEESLYKDVGAAEVRLLILENILL
SPAYDVYLLAGTSIRYKVLKIRQGTITELSMPCDQYELHLQNSVIGTDGNPDVAVAGLDQ
STSTVTAIQLGHINVVLDHKSLRMQGVSRLPNSTLYVVEAGYLGFKIHPGDSWVLETSRV
YDVIIEVFDKSGNKIDLSDNVRIDTGFPSEYLELLESSVNGSYHRVKALKEGLTLIDATL
KAVVDETGSIHALANPVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIQAAGGSGNF
SWSSSNTAVATVTVKGVMTTVSDIGVSAVYAHDLRNSLHFGQMKVYVVEPVAMDFAPCPV
EARVGLVLDLPLRIFGVLEDGERERVMLSDCSQFDLQVEEENHGVFQLLDGRLAPGQEHC
SGVRAKALAPGYTILTVSYTHGNVHLSVKITIAAYLPLRAVDPVSVAVVTLGSSKDMLFE
GGPRPWVLEPSKFFCNLSAEDEASVSLTLTNPSSHNYNQHWVRATCRALGEQVLEVMVGN
KASVTNPFPAVEPAVVKFVCAPPSRLTLVPVYSSPQLDLSCPLLQQNKQLVPVSNYRNPI
LELAAFDQQGRKFDNFSSLSVLWKSSMVSLASIEPTLPMELQLLEDDNKQMKLHGRQTVL
VHHQTGIAAITVTALRYQVLHLAAAKVPSPYDTLTPVSATLELLLVEDVKVSPDVVTIYN
HPDVRANLALREGSGHFFVNTSVKGIANVVFQEAQGTAQVSPVQPGEVKVMVHDLCLAFP
SPAKATVHVSDILEVYVRVVDKVEISKSVTAYVRVLDDNKKPFPASYFRFMNLKLKAAST
IVSLKHLAESTELDTAVFMVKGVSIGQTTLSAVVVDTNGRKIASAPQQIEVFPPFKLIPR
KMTLLIGAMMQITSEGGPQPQSNILFSISSEEIASVNGIGHVKGVTIGNVTVTGLVQAVD
AETGKLVVVSQDQVEVEVVQLTGIRIRAPITRMKTKAQMPVYVMGLTNSQTPFSFGNAVP
GLTFTWSTTKRDILDVQPRHIEANVELQSEHNFGMRVTGRTRGRTGLKVVLRVTDRNAGQ
LLGNLQELKDEIQIQVYDKLHMLNPEVEAGELLMAPNSALKLQTSRDGVGALSYQMLECP
DQVVIAQVDDKGFLFSGSLTGSSSLLITSQETFGVNQTLILALKVVPVSYVRFSTSPVLY
THTRESLKALPLGIVLTFTVHFHASTGEALHSSNSHLTFSTNRDDLVQVGVGPGNHTLTV
RTVNVGLTLLAAWDSENVGVADYVPLPVGHAIHPDEAHRLVVGDVVCFSAQLTSTDGGHG
TWSSSSNGVLQVDPKSGAAVARDSGTVTVYYEIPGVVKTYREVVVEATTRTAATAQTTPV
RIGKETKVLLTTRERGTNLIGTCSSAQTRAISQLQPETSVSCHLSFTSDAIDFPTNDVFE
THTSFDSSIGSYTCSITLQPMTDQQTRVLSMSMSNLLVRAGLQGGVLSGEQVGVRLPIEP
GLYSDQTELLLSNLHTSAELTVYGPAAALSSMEVVSASPNIAVQEKEVHQGFPSYSKYTI
SAVDPQAAVTTSVSISSTSYGQSVVIPVTLIQVADPSAAKLAAAPPVVPAEGGHSLHSFI
NCYQMMFFTLFALLAATAIIIIVLHTVFSPREQTNHPAFMQRSSSPNSGLTYTAMNRSIP
MRDPNNSPRSRLYSPEYKS
NT seq
5640 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggtgaggctgtcggtggtcgcgctgctcctgctctcagttcacggatactcg
aaactaaacatccccaaagtgctgctgcctctcgcgagaagtacaagaattaacttcacg
ttggagacaacagagggctgctacagatggtctaccaccagaccagaggtcgcaagcatc
caggctgtggatgaggagagcggcagaggctgctccaggaaggctgttctccaggctcgc
tccacccatccctccagactgaccagcatcattctggccgaggatgttgttacaggacag
gtgctgcgttgtgacgccattgtcgacatcatcagtgagatccagatagtgtcgaccacc
agagagctacatcttgaggactcgccactggcactcaaaattcatgcactggactctgaa
ggaaacaccttcagcacccttgctggtctggtgtttgactggaccttagtgaaagatgta
gatgtgaatggattctctgactcttataatgcattacgggtacttaagttctcagagtcc
acctacacaccccctggatacatatctgaaatggagcgtgttgggaaacagggggatatg
attttggtatcaggacagaaaacaggacatgctaaattaaaggctaaattagaagagtca
ttgtataaggatgtgggtgccgcagaagtgagactcttgatattagagaacatcctgctg
agtcctgcgtatgatgtctacctgctggcgggaacttccatccgatacaaagttctgaag
ataagacagggcacgatcacagagctctctatgccctgtgatcagtatgaactgcacctt
cagaacagtgtgattggcactgatggaaacccagacgtcgccgtggccggtctggatcaa
agcacatcaacggttacagcaattcaacttggacacatcaacgtggtgctggatcacaag
agccttcgaatgcagggagtgtctcgcctgccaaacagcactctgtatgtggttgaagca
ggctacctaggttttaaaattcatccaggagacagctgggttctcgagacaagccgagtc
tatgatgtcattatcgaagtctttgataaatctggcaacaaaattgacctctctgataac
gtccgtattgacactggtttcccctctgagtacttggagctcctggagtcttctgtgaac
ggatcgtatcatcgagtcaaagcgctcaaagaaggcctaaccctgattgatgcaacctta
aaagctgttgtggatgaaactggaagcatccatgcactcgccaacccggtccacaacgaa
caggatgtagaaatctataaccctatagttcttagtcccagtattctgacatttccatgg
cagcccaaggttggagcgtatcagtacacaatacaggcggccggagggagtggaaatttc
agctggtcttcctccaacacagctgtggccacagtgaccgtgaaaggagtgatgacaaca
gtgagtgacatcggcgtcagtgcagtttacgctcacgatctgcgcaactcactacacttt
ggccagatgaaggtgtatgttgtcgagcccgtcgccatggacttcgctccttgcccagta
gaggccagggtgggcctggttctggatctgcccctcaggatcttcggcgtcctggaggat
ggggagagagagcgggtcatgttgagtgactgctcccagtttgacctgcaggttgaggag
gagaaccacggcgtcttccaactactagacgggaggctggctccgggccaggagcactgc
agtggggtgagagccaaggccctggcccccggatacaccatccttactgtgagctacacc
cacggcaacgttcacctcagtgtcaagatcaccattgctgcatatcttcctctcagagcg
gtcgaccctgtgtccgttgccgtggtgactctaggatcatctaaagacatgctgtttgag
ggcggtcctcggccttgggttttagagccctcaaagttcttctgcaacttgagcgctgag
gatgaggccagcgtgagccttactctgaccaatccctcgtctcacaactataaccagcac
tgggtcagagccacctgcagggcactgggagagcaggtgctggaggtgatggtgggaaac
aaggccagtgtgaccaatccttttcctgccgtggagccggcagtggtcaagtttgtgtgt
gcccctccgtctcgcctcaccctggttccagtgtattccagcccacagctggacctgagc
tgcccgctgctgcagcagaacaaacaattggtacctgtttcaaattaccgtaatcccatt
ttggaattggctgcttttgatcaacaaggaaggaagtttgacaacttcagctctctgagc
gtattgtggaaatcgtccatggtgtcgctggccagtattgaacccactctacccatggag
ctacagctgctggaggatgacaacaaacagatgaagcttcacggccgacagacggttctc
gtccatcatcaaaccggcattgctgccatcacagtgacagctctgcgttaccaggtttta
catctcgcagcagctaaagttcccagtccatatgacaccttgacccctgtctcagccact
ctggagctgcttttggttgaagacgtgaaggtttctcctgacgtagttactatatacaac
cacccagatgtgcgggcgaacttggccctgcgagaaggatcaggacacttttttgtcaat
accagtgttaaagggatcgcgaacgtggtattccaggaggcccaaggaacagctcaggtc
tctcccgtccagccaggggaggtgaaggtgatggttcacgacctttgtctggcatttcca
tcaccagccaaggccacagtgcacgtttctgatatcctggaggtttacgtgagagtggtt
gacaaggtggagattagcaaatctgtgacagcttatgtcagggtcctggacgataacaag
aagcccttcccagccagctatttccgtttcatgaatcttaaactcaaggcagcttctaca
atcgtttctctaaaacacttagcggagtccaccgagcttgatacagctgttttcatggtg
aaaggtgtttctattggtcagaccactctatcagccgttgtagtggatacaaatgggaga
aaaattgcatctgcacctcaacaaattgaggtatttccaccgttcaaactcatcccaagg
aaaatgaccctgctaatcggagcaatgatgcaaatcacatctgagggtggccctcaacct
cagtccaatatccttttctctatttcaagtgaggaaatagcttctgttaatggcatcggc
cacgtcaagggtgttaccatcggaaatgtcactgtgactggactggtccaagctgtagat
gcagagactgggaaactagtcgttgtgtctcaggatcaagtagaagttgaagtcgtgcaa
ttgacgggcattcgaatccgagcacctatcacaagaatgaaaacaaaggcacagatgccc
gtatacgtgatgggtctgactaatagtcaaacgcccttctcctttggcaatgctgtaccc
ggcctcaccttcacctggtccaccaccaagagagacattctggatgtgcagccaaggcac
attgaggctaacgtggagctccagtcagagcacaactttggcatgagggtgactggaaga
acgagaggacggacagggctgaaggtggtgctcagagttactgaccgcaatgctgggcag
ctactggggaatctacaggagctcaaggatgagatccagatccaggtctatgacaagcta
cacatgcttaatcccgaagtagaggcgggggagttactgatggctccgaactcagccctc
aaactccaaactagcagggacggcgtaggtgcactctcttaccagatgctggagtgccct
gaccaggtcgttatcgctcaagtggatgataagggcttcctcttctctggctctcttacc
ggcagctcctctctgctgatcacctcgcaagagacctttggtgtcaatcaaactctcatc
ctcgctttgaaggttgtacccgtgtcctatgtgcgcttcagcaccagtccggtgctctac
acgcacaccagggagagcctgaaagccttgcccctgggcatagtgctcaccttcactgtc
cactttcacgccagcacgggagaagcccttcacagctccaactcccaccttacgttttcc
acaaacagagatgacttggtgcaggtgggggttggacccggtaaccacactctaacggtg
aggaccgtcaatgtaggcctcactcttcttgcagcgtgggacagtgaaaacgtgggtgtg
gcggactacgttccacttcctgtcgggcacgccattcacccagatgaggcccacagactg
gtggtgggggatgtggtctgcttctctgcccagttaaccagcacagatggtggtcatggt
acttggagctcctcatctaatggtgttcttcaggtggaccctaaaagtggtgcagcagta
gccagagactctgggacagtaactgtgtactacgagatacctggtgttgtgaaaacctac
agagaggtagtagtagaagcaacaacacggacggctgcgacggcccagacgacaccggtc
aggatcggcaaggaaacaaaagtcctactcactaccagagagagaggaaccaacctcatt
ggaacctgttcctctgcccagactagagccatttcacagctgcagccagaaacctctgtc
agctgccacctcagcttcaccagtgatgcgattgacttccccactaatgatgtcttcgaa
acacacaccagctttgactccagcattggctcctacacatgctccataaccttgcagccg
atgacggaccagcagacccgtgtgctcagcatgtccatgtccaacctgctggttagggcc
ggcctgcagggcggtgtgctctctggggaacaagtcggcgtcaggctgcccatagagccg
ggcctctactcggaccagactgagctgctgctctcaaaccttcacacatcagctgaactc
accgtctacggccccgctgctgccctgtccagcatggaggtggtgtctgcttctcccaac
atcgctgtccaagagaaagaagtacaccaaggcttccccagttactcaaagtacaccatc
agcgctgtggaccctcaggcagcggtcaccacctccgtctccataagcagcacttcctac
ggccagagtgtcgtcatcccagtcactttgatccaagtggctgatcccagtgctgccaag
ctagcagctgctcctccagttgttcccgctgaggggggccactccctgcacagctttata
aactgctaccagatgatgttcttcaccctgttcgctctgctggccgctacagccatcatc
atcatcgtcctccacactgtgttcagcccaagggaacaaacgaatcaccctgccttcatg
cagaggtcatcttcacccaactcaggtttaacctacacggcaatgaaccgttccataccg
atgagggacccaaacaacagccccaggtcgcgtctctattctccagaatacaagtcctga
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