Anoplopoma fimbria (sablefish): 129101424
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Entry
129101424 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04137
Mitophagy - animal
afb04141
Protein processing in endoplasmic reticulum
afb04210
Apoptosis
afb04217
Necroptosis
afb04621
NOD-like receptor signaling pathway
afb04622
RIG-I-like receptor signaling pathway
afb04920
Adipocytokine signaling pathway
afb05132
Salmonella infection
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129101424
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129101424
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129101424
09143 Cell growth and death
04210 Apoptosis
129101424
04217 Necroptosis
129101424
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129101424
04622 RIG-I-like receptor signaling pathway
129101424
09152 Endocrine system
04920 Adipocytokine signaling pathway
129101424
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129101424
09171 Infectious disease: bacterial
05132 Salmonella infection
129101424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afb03019
]
129101424
04121 Ubiquitin system [BR:
afb04121
]
129101424
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129101424
Messenger RNA biogenesis [BR:
afb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129101424
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
129101424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
zf-RING_4
Sina_ZnF
MATH
zf-RING_6
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
129101424
NCBI-ProteinID:
XP_054467223
LinkDB
All DBs
Position
13:11463987..11475416
Genome browser
AA seq
501 aa
AA seq
DB search
MAAQEQSPPSSLEGNKPGFPKKILANSLEDKHLCNSCQKVLRRPLQAQCGHRFCSFCFNK
TVSSGPQECGACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWTGTIKE
FEASHEGHCDFMIILCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKCKAPCRFHVVGCDTSVEKEKLHDHERQCS
YEHLNLLLHFIMGIKLQLQSEKAKVAELSRRCQELELKVGTFENIVCVLNREMERSCTTM
EAYNRQHRLDQDKIEILNNKVRQLERTVSLRDLSIVEMDGKMXEMSAATYDGIFVWKISD
FTKKRQDAVAGRXPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDA
LLKWPFNQKVTLMLLDQNNREHIIDAFRPDVSSSSFQRPVSDMNIASGCPLFCPLAKLDS
KNSYIRDDTIFIKAIVDLTGL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaggagcagtctccaccatcttccctggaaggcaacaaaccaggcttccca
aagaaaattttggccaacagcctcgaggacaagcatttgtgcaactcgtgccagaaagtg
ttgcgaaggcccctgcaggcccagtgcggtcaccgcttctgttcgttctgtttcaacaaa
actgtgagctccggaccacaggagtgcggtgcttgcattaaagaagacttgttcgaagaa
cccacctccattctcaagcaaggcggtgctttccctgacaatgcagctcggagagaagtg
gaggccctggcggccgtctgtcccaacgaaggatgcacgtggacggggaccatcaaagaa
tttgaggccagccacgagggtcactgtgacttcatgatcatcctgtgtccgtcctgcaaa
gaactgatgagagccaacgaacaggagcgccacaacgagagggaatgtccagagaggacg
ctcaactgcaaatactgcaaggaacccttcctgttaaagaacatcaaggctcatgatgaa
atctgtccaaagtacccaatgatttgcgaaggctgtgcaaagaaaaagatccccagagaa
aagtatgtggaccatattaagttctgcagtaaatgtaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaagctccatgaccacgagcgacagtgttca
tacgaacacctcaacctgctcctgcacttcatcatgggcatcaagctgcagctccagagc
gagaaggccaaggtggccgagctgagccgccgctgccaggagctggagctcaaggtgggc
acgtttgagaacattgtgtgcgtcctcaaccgggagatggagcgctcctgcaccaccatg
gaggcctacaaccgccagcaccggctggaccaggacaagatcgagatcctcaacaacaag
gtccgtcagctggagaggacggtgagtctgagggacctgtccatcgtggagatggacggg
aagatgnaggagatgtcggcagccacgtacgacggcatctttgtctggaagatctctgac
ttcaccaagaagaggcaggatgccgtggcgggccgcngccccgccatgttctctcctgcc
ttttacaccagtaaatacggctacaagatgtgcctgaggatctacctgaacggcgacggg
acgggccgaggcacccacctgtctctgttctttgtggtgatgagaggacacagcgacgct
ctgctgaagtggccttttaaccagaaggtcaccctgatgctgctcgaccagaacaacagg
gagcacatcatcgacgccttccggcccgacgtctcctcctcgtccttccagaggcccgtc
agcgacatgaacatcgccagcggctgcccgctcttctgtccgctcgccaagctggactca
aagaactcctacatacgcgacgacaccatcttcatcaaggccattgtagacctcaccggg
ctctag
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integrated database retrieval system