Anoplopoma fimbria (sablefish): 129101580
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Entry
129101580 CDS
T09102
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129101580 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
afb04054
]
129101580 (nod2)
Pattern recognition receptors [BR:
afb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129101580 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
LRR_4
AAA_16
PND
AAA_29
Motif
Other DBs
NCBI-GeneID:
129101580
NCBI-ProteinID:
XP_054467428
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All DBs
Position
2:9592157..9597888
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AA seq
989 aa
AA seq
DB search
MFVQELVLRQRTEILHALCSSGSAEHLEQVLDILLSQGELIWEDYQNIQVPGRTLYTNVR
QLLDLVYTKGVDTCALFYAAVKQVLPEEQGAGLSLSECCSNLEEKEEHQSTSTQTLLTQR
PSLVSKLQGCIDDALKALVLSGHFTSADCDEVRLPIHTPSQQARRLLDHVRSKGESAAKV
LLQYIQQKQESGSLLNQEKWTPPKEVLKYQKKLSSSVSAQSCFLSTYGGTSHMSLDDIYT
GGQLELAHNCENINAPLGLEDVVGAAGTVNEEADTVLVSGDAGGGKSTLLQRLHLLWARG
TALQEFLLLFPFSCRRLNSEQREMSVQELLFQHCCWPDREQEEIFQFILDHPHLILLTFD
GLDELKQSFSDEHRLCCPTQRAPVYILLFNLIQGSLMKGVRKVVTSRQEAVGPVLKKHLR
KEVLLQGFSPSGIDCFVRKHHRDPTVAAKVLESLQTNTALLGLCHSPVLCWIVSQCHKEL
LGCGEGSPKTITDVYLMILQHFFQHQSSLKSTVGSSWLQEHLNTVLHLGQLAFEGIGTSC
YVFSGTDLETCGVTEKDICMGFLIQSKDMSSTHSKRFEFLHLIMQCFFAALYIVLSNNTD
RSTIPKLFELQNTRETGLRSSTCFGACLPSTDQHEQALKGEATSAETPNLQITATFVSGL
LSQRHRSLWLHCCPSAVLEKRVRQVVRCLSKGLQKHFKSIPQPVAGEKKSMHAMPGFVWL
IKCIYEMQESRIAKDAMSKLEVDHLKLTYCNIGPVECTALAYVLQHLRNPVGLQLDNNSV
GDVGVEQLLPCMHICNSLYLRNNNITDEGIRKLLAKGIQCDSFQKIALFNNKLTDACTQH
FSHLLKTKRFISLRLGNNNITEEGAKQLAEGLKHNHSLEYLGLWGNKIKDAGAVALASAL
ESSTTLVWLSLVGNGVGSVGACALANIIKNSTSLEQLWLTENCITRTGVECLIQALEHNT
HMKSVWLINNDLSLEEVEELKQRESRLIF
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccaggagcttgtgctgaggcaacggacagagatactgcatgcactgtgcagc
agtgggtcagctgaacatctggagcaggtcctggacatattgctgtctcagggggagctc
atatgggaggactaccagaacattcaggtaccaggcaggaccctgtataccaatgtcaga
cagctgcttgacctggtttatacaaagggtgtggacacctgtgcactcttctatgctgct
gtcaaacaggtcctgcctgaagagcagggagctggtttatcactttcagaatgctgttca
aatctagaggagaaagaagaacaccaaagcacatctactcagactcttctgactcaaaga
ccaagcctggtcagcaagctacaaggctgcattgatgatgctctgaaggctcttgtctta
tcaggacactttacctcagccgactgcgacgaagtgcggctgcctatacacaccccctct
caacaggcaaggcgtttgcttgaccacgtcagatcaaaaggagaatcagcagcaaaggtt
ctactgcagtacattcagcaaaaacaggaatctggatctctgctaaaccaggagaaatgg
actcctcccaaagaggtcttaaagtatcagaagaagctcagcagttctgtgtctgctcag
tcctgcttcctcagtacttatggagggaccagccacatgtctctggatgacatctacact
ggggggcagctggaacttgctcataactgtgaaaatatcaatgcacctttgggcctggag
gacgtagttggtgcagccggtacagtgaacgaggaggccgacacagtgctggtgtctggg
gatgcaggcggtgggaagagcaccttactccagaggctgcacttgctttgggctcggggg
acggccctccaggaatttctcctcctgttcccattcagctgtcgcaggttgaattcagag
cagagggaaatgtctgtccaggaactgctgtttcagcactgctgctggccagacagggag
caggaagagattttccagttcatcctggaccacccacatctcatcctcctcaccttcgat
ggcctggatgagctcaagcagagcttttcagatgagcacaggctctgctgccccacccag
cgtgcacctgtttacatactattgttcaacttgatccagggctcattgatgaagggtgtg
cggaaagtggtgacgagtcgccaagaggcggttggccctgtgttgaagaaacacctccgc
aaagaggttctcctgcaaggcttttccccaagtgggattgactgttttgtgaggaagcat
caccgtgaccccactgtggctgctaaggttttggagtccctacagacaaacaccgcctta
cttggactgtgccatagtccagtcctctgctggattgtctcacagtgccacaaggagctg
ctaggttgcggagaaggcagcccaaaaacaatcacagacgtttaccttatgatcttacag
cactttttccagcaccaaagctccctcaagagcaccgtggggtcaagttggcttcaagag
caccttaacacagtgttgcatctcgggcagcttgcctttgagggaataggaacaagctgt
tacgtcttctcaggtactgaccttgagacatgtggcgtaactgagaaagatatctgcatg
ggctttttaatacaaagcaaagatatgtcctccacccacagtaaacgttttgaatttttg
catttgattatgcaatgcttctttgctgctctgtacattgttttgtcaaataacactgac
cgttcaactatccctaagctctttgagctgcagaacacgagagagacaggtctgaggagc
agcacatgcttcggggcctgcttgccttccactgaccaacatgagcaggctttaaagggg
gaagctacatcagctgaaacaccaaatctgcaaatcacagccacctttgtgtctggacta
ttgtcccagcgccatcgaagcctgtggctccactgctgccccagtgcagtgctggagaag
agggtcagacaggtggtgagatgtctgtccaaaggcttgcagaaacactttaagtccatc
cctcaacctgtagcgggggagaagaagagcatgcatgcaatgccaggcttcgtctggctt
atcaaatgcatctatgagatgcaggagagcaggattgctaaagatgccatgagtaagctt
gaggtggaccacctgaaactgacctactgtaacatcggtcctgtagagtgcactgctcta
gcctatgtgctccagcatttaaggaatcctgtcggcctccagcttgacaacaactctgtg
ggcgatgtaggagtggagcagcttcttccctgcatgcatatttgcaattccctgtacctc
agaaataataacattacagacgagggaatccgcaaactgcttgctaaaggtatccagtgt
gacagcttccagaaaattgcgcttttcaacaacaagctaactgatgcttgtacacagcac
ttttctcatcttctgaagaccaagcgtttcatttctctgaggcttggcaacaataatata
acagaagaaggagcaaagcagctggcagagggactgaaacacaaccattcactggagtat
ttagggctttggggcaacaagataaaagatgcaggagcagtggcccttgccagtgctctc
gagagcagcacaactctggtgtggcttagtcttgtaggcaatggtgttgggagtgtggga
gcatgtgccctcgccaacattatcaagaacagcacgtcactggaacagctttggttgaca
gagaactgcattaccagaacaggggtggaatgtctgattcaagccttagaacacaatact
cacatgaaatctgtttggttgataaacaatgacctcagtttggaggaggtggaggagctg
aaacaacgggaatcaagactgatcttctga
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