Anoplopoma fimbria (sablefish): 129102855 Help Entry 129102855         CDS       T09102                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism afb  Anoplopoma fimbria (sablefish) Pathway afb04010   MAPK signaling pathway afb04137   Mitophagy - animal afb04141   Protein processing in endoplasmic reticulum afb04210   Apoptosis afb04217   Necroptosis afb04621   NOD-like receptor signaling pathway afb04622   RIG-I-like receptor signaling pathway afb04920   Adipocytokine signaling pathway afb05132   Salmonella infection afb05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:afb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     129102855 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     129102855 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     129102855 (traf2b)   09143 Cell growth and death    04210 Apoptosis     129102855 (traf2b)    04217 Necroptosis     129102855 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     129102855 (traf2b)    04622 RIG-I-like receptor signaling pathway     129102855 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     129102855 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     129102855 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     129102855 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:afb03019]     129102855 (traf2b)    04121 Ubiquitin system [BR:afb04121]     129102855 (traf2b) Enzymes [BR:afb01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      129102855 (traf2b) Messenger RNA biogenesis [BR:afb03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      129102855 (traf2b) Ubiquitin system [BR:afb04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     129102855 (traf2b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-RING_6 Sina_ZnF zf-RING_2 zf-RING_UBOX TRAFD1-XIAF1_ZnF ATG16 zf-C3HC4_5 Motif Other DBs NCBI-GeneID:  129102855 NCBI-ProteinID:  XP_054469105 LinkDB All DBs Position 14:complement(14765678..14780639) Genome browser AA seq 520 aa AA seqDB search MARISLDCPNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS GPKPCEACRQEEIYEEPISILNSNEAFPDNAAGREIASLPARCLNPGCDWTGSIKEYEAQ HEGRCEFERIQCEACQTSILRTEKDRHNERECEARTLNCKYCKLTFNFKEIKAHDEICLK FPVQCKECGKKKIPREKFNDHSKSCAKSKSACPFSEVGCKTVIDNGKLVDHEHNSTMEHL RLLLPMVLSVSRPQADCSGPGEWQEDSGLGLYRAPEEGVPMGTGAAASMPSVDVEKKVTA LENIVCVLNREVERSSVTLEAFSHQHRLDQEKIENLSNKVRQLERTVSMRDLQLSETEQL LKELQFCTYDGIFVWKISDFSRRRQDAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGDGT GRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPIS EMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1563 nt NT seq  +upstreamnt  +downstreamnt atggcccgaatttcgttggactgccccaactctttaccagggattcccctcagtgtgctg tcagtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaagcct gtccaggctcagtgcggccaccgcttctgtgtacactgcttcaagcagctcaccagttct gggccaaagccttgtgaagcctgccgccaagaggagatatatgaggagcctatttccatt ctcaatagtaatgaggcttttccagacaatgcagccggtcgagaaatagcaagtctgcct gccaggtgtttgaacccgggctgtgattggacaggctcaataaaagagtatgaggcacag catgaaggccgttgtgaatttgaaaggatacagtgtgaggcctgccaaacctccatcctt cgtacagagaaggacagacataatgagagagaatgtgaagcaagaacgctcaactgtaaa tactgcaaattgaccttcaactttaaagaaatcaaggcccacgatgagatctgtttgaag tttcccgtacaatgcaaggaatgtggcaagaagaagatcccgagagaaaagttcaatgac cacagcaaatcttgtgccaagtcaaagagtgcctgtccattcagtgaagtgggctgtaaa actgtgattgacaacgggaagctcgtcgaccatgagcacaacagcaccatggagcacttg cgtctgctgctgcccatggtgctgtccgtgtctcggccacaagccgactgttctggtcca ggagagtggcaggaggactctggtctgggcctgtacagggctcctgaggagggagtccct atgggcaccggagctgcagcctctatgccgtctgtggatgtggaaaaaaaggtgaccgct ttggaaaacattgtgtgtgtattgaaccgagaggtggagcgcagctcagttacattggag gctttctcacatcagcatcgattagaccaggaaaaaattgaaaatctctccaataaagtg cgtcagctagagcggacagtctccatgagagacttgcagctgtctgaaactgaacagctg ttgaaagaactccagttctgcacatacgacgggatatttgtgtggaaaatctctgacttc tcgcggcgcagacaggatgctgtggccggtcgaacacctgcaatgttctcaccagcgttt tactccagcaaatacggctacaagatgtgtctgaggctatatttgaacggcgatggaacc ggtcgaggaacacatctttcgctgttctttgtcgtcatgaggggaaagtgtgacgctctg ctcaaatggccgttcagccagaaggtgactctaatgctcttggatcagaacaacagggag cacattatcgatgctttccgccctgatgtcacctccacatcctttcagaggccaattagt gaaatgaacatcgccagcggctgcccgctcttctgtcccctggccaaactggctggcaag agcccctatctcagagatgataccattttcatcaaagctattgtagacctcacaggcttg taa

DBGET integrated database retrieval system