Anoplopoma fimbria (sablefish): 129103095
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Entry
129103095 CDS
T09102
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04620
Toll-like receptor signaling pathway
afb04621
NOD-like receptor signaling pathway
afb04622
RIG-I-like receptor signaling pathway
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129103095 (traf3)
04621 NOD-like receptor signaling pathway
129103095 (traf3)
04622 RIG-I-like receptor signaling pathway
129103095 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129103095 (traf3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-TRAF_2
DUF4201
ATG16
Sina_ZnF
EzrA
Crescentin
zf-C3HC4_4
MctB
ATG17_like
Synaptobrevin
AAA_13
Fzo_mitofusin
zf-RING_6
TolA_bind_tri
GAS
Fez1
DUF724
FapA
Motif
Other DBs
NCBI-GeneID:
129103095
NCBI-ProteinID:
XP_054469343
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Position
15:complement(149146..159958)
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AA seq
595 aa
AA seq
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MSAGRSADGREVQIPLQQVAPSLTTPLSLAPPIIPPSHRQVNPWPPSDPTTSQGVPAGFL
PLHGGFRDHFVLTPEAKYCCETCRLVLCQPRQTECGHRFCQSCINDILSHQNPVCPADME
PLFKDKIFRDVCCHREIMALRVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFTRYGCTFKGLNQDMRQHESTLAAEHLRMMANRNSTIENKV
EDIKGELLERYKVLPALSSRLSELENQSDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVESLRGTLETVRTRLNTLEQGGRSGTGSTTHTLASMENQLKRHDEMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacgcccctctcgttggctccgcccatcatcccgccctctcaccgccaa
gtcaatccctggcctcccagtgaccccaccacgtcgcaaggtgtccctgcagggttcttg
cctcttcacggaggattcagagatcactttgttttgactccagaagccaaatactgctgt
gagacctgccgcctggtcttgtgtcagccccgccagacagagtgtggacatcgcttctgt
cagagctgcatcaacgacatcctcagtcatcaaaacccagtatgtccagctgacatggag
cctctgttcaaagacaagatcttcagagacgtttgctgccatcgggagatcatggcactg
agagtttactgtcgcagtgaagctaacggctgtcaggagcagatgagtctgcagcagata
ccagaccacctgaatgtgtgtccgttcttcgaggttccctgtccgttgggtaaatgtaaa
gaacgaatgatgaggaaagagattcctgaccacctgagctggaaatgtaaacacagagag
accagctgcgagttctgcatgaccaagatgcctctcaccgacctgcagaaacacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgctccttttcctcccttccc
cggagtgagctgtccagccaccaacacgactgtcccaaagctcaggtgagctgtcagttc
acccgctacggctgcacctttaagggtttgaaccaggacatgaggcaacatgagtccacc
ttggcagctgaacacctgagaatgatggccaacagaaactccacgatagagaacaaggtg
gaggatattaaaggtgagctgttggagaggtacaaggtgctccctgctctcagcagtcga
ctgtctgaactggagaaccagagcgacgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctctcattcagagaagctcctggaggtggag
ctggaacttcgttctctccgtgtgctcagagacgaggtggagagcctgagaggaacgctg
gagaccgtccggacgagactgaacactctagaacaagggggacgcagcgggactggatcc
acaacacatactctggcatccatggagaatcagctgaagcgacatgatgagatgctgagt
gtccatgagatccgtttagccgacatggacctgcgtttccaggtgctagagacggcgagt
tacaacgggacactgatctggaagatccgggactacaagagaaggaaacaggaagcggtg
gcggcgaagacactgtcgctgtactcacagccattctacacaggatattttgggtacaag
atgtgcgcccgtgtgtacctgaacggagacggcatgggcaaggggacgcacctatcactg
ttcttcgtggtgatgagaggcgagtacgacgccctgctgccctggcccttcaaacagaag
gtaactctgatgctgatggaccagggtccgtcgaggaaacacttgggggatgcctttaag
cctgatccaaacagcagcagcttcagacgccctgcagcagagatgaacattgcctctggt
tgtcctctgtttgtttctcagagcgtcctggagactggcagctacatcaaagacgacacc
atcttcatcaaggttaccgtggatacctccgacctacctgacccgtga
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