KEGG   Anoplopoma fimbria (sablefish): 129103095
Entry
129103095         CDS       T09102                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04620  Toll-like receptor signaling pathway
afb04621  NOD-like receptor signaling pathway
afb04622  RIG-I-like receptor signaling pathway
afb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    129103095 (traf3)
   04621 NOD-like receptor signaling pathway
    129103095 (traf3)
   04622 RIG-I-like receptor signaling pathway
    129103095 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129103095 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-TRAF_2 DUF4201 ATG16 Sina_ZnF EzrA Crescentin zf-C3HC4_4 MctB ATG17_like Synaptobrevin AAA_13 Fzo_mitofusin zf-RING_6 TolA_bind_tri GAS Fez1 DUF724 FapA
Other DBs
NCBI-GeneID: 129103095
NCBI-ProteinID: XP_054469343
LinkDB
Position
15:complement(149146..159958)
AA seq 595 aa
MSAGRSADGREVQIPLQQVAPSLTTPLSLAPPIIPPSHRQVNPWPPSDPTTSQGVPAGFL
PLHGGFRDHFVLTPEAKYCCETCRLVLCQPRQTECGHRFCQSCINDILSHQNPVCPADME
PLFKDKIFRDVCCHREIMALRVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSFSSLP
RSELSSHQHDCPKAQVSCQFTRYGCTFKGLNQDMRQHESTLAAEHLRMMANRNSTIENKV
EDIKGELLERYKVLPALSSRLSELENQSDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRVLRDEVESLRGTLETVRTRLNTLEQGGRSGTGSTTHTLASMENQLKRHDEMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtcagcggggaggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccacgcccctctcgttggctccgcccatcatcccgccctctcaccgccaa
gtcaatccctggcctcccagtgaccccaccacgtcgcaaggtgtccctgcagggttcttg
cctcttcacggaggattcagagatcactttgttttgactccagaagccaaatactgctgt
gagacctgccgcctggtcttgtgtcagccccgccagacagagtgtggacatcgcttctgt
cagagctgcatcaacgacatcctcagtcatcaaaacccagtatgtccagctgacatggag
cctctgttcaaagacaagatcttcagagacgtttgctgccatcgggagatcatggcactg
agagtttactgtcgcagtgaagctaacggctgtcaggagcagatgagtctgcagcagata
ccagaccacctgaatgtgtgtccgttcttcgaggttccctgtccgttgggtaaatgtaaa
gaacgaatgatgaggaaagagattcctgaccacctgagctggaaatgtaaacacagagag
accagctgcgagttctgcatgaccaagatgcctctcaccgacctgcagaaacacaaagag
acggtgtgtccagcgttcccagtgtcgtgtccaaaccactgctccttttcctcccttccc
cggagtgagctgtccagccaccaacacgactgtcccaaagctcaggtgagctgtcagttc
acccgctacggctgcacctttaagggtttgaaccaggacatgaggcaacatgagtccacc
ttggcagctgaacacctgagaatgatggccaacagaaactccacgatagagaacaaggtg
gaggatattaaaggtgagctgttggagaggtacaaggtgctccctgctctcagcagtcga
ctgtctgaactggagaaccagagcgacgagctgagagagaagaaccgacagatggagcag
aaactggccaccatgcagaaactaatgagctctcattcagagaagctcctggaggtggag
ctggaacttcgttctctccgtgtgctcagagacgaggtggagagcctgagaggaacgctg
gagaccgtccggacgagactgaacactctagaacaagggggacgcagcgggactggatcc
acaacacatactctggcatccatggagaatcagctgaagcgacatgatgagatgctgagt
gtccatgagatccgtttagccgacatggacctgcgtttccaggtgctagagacggcgagt
tacaacgggacactgatctggaagatccgggactacaagagaaggaaacaggaagcggtg
gcggcgaagacactgtcgctgtactcacagccattctacacaggatattttgggtacaag
atgtgcgcccgtgtgtacctgaacggagacggcatgggcaaggggacgcacctatcactg
ttcttcgtggtgatgagaggcgagtacgacgccctgctgccctggcccttcaaacagaag
gtaactctgatgctgatggaccagggtccgtcgaggaaacacttgggggatgcctttaag
cctgatccaaacagcagcagcttcagacgccctgcagcagagatgaacattgcctctggt
tgtcctctgtttgtttctcagagcgtcctggagactggcagctacatcaaagacgacacc
atcttcatcaaggttaccgtggatacctccgacctacctgacccgtga

DBGET integrated database retrieval system