Anoplopoma fimbria (sablefish): 129103418
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Entry
129103418 CDS
T09102
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129103418 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129103418 (c9orf72)
Membrane trafficking [BR:
afb04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129103418 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
129103418
NCBI-ProteinID:
XP_054469863
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All DBs
Position
15:15973133..15986963
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWTPKGDQVMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGYNIISVLSCEIVPIMELLASMKSHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEEDIPPDTVIHTDETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFKSLRNLKTDLDL
TVEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtccaccccagtcaccagccgtggcaaagtccgaggtagcagtagag
ggagaatgcccgctgctggctgccaccttcgcctactgggacaacatcctgggtcctcgg
gtgcgccacatctggacgccgaagggagatcaagtgatgttcctcagcgacggagaggtc
acgtttttggccaatcacacactcaacggggagattctgcgcagcgctgagtgcggcgcc
gtggatgtgaagttctttgtgctggcagaaaagggcgtcatcatcgtgtctctcatcttc
gacggcgagctgaagggggacaagaacacgtgcgccttgtccattatcctcccacagacc
gagctggccttctacttgcctctgcacaccatctgcgtggagaggctaaagcatgtcatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctgagctgtgag
attgtccccatcatggagctgttggcctccatgaagtcgcacagtgtgccggaagacata
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcagacttgcggctgttcgatagtggttggaagc
aacccggagaaagtaaataagattgtgcggactctctgcctcttcctcaccccggctgag
aggaagtgctcccgcctctgcaaggctgactcttcttttaaatatgacacgggcctgttt
gttcagggtctgctcaaggactccacaggcagcttcgtcctgcccttccgccaggtgctc
tactccccgtacccgaccacgcacatcgacgtggacatcaacacggtgaagcagatgccg
ccgtgccacgagcacacctacaaccagcggcgctacatgcggtccgagctgagcgccctg
tggaagacggacagcgaggaggacatcccccccgacacggtcattcacactgacgagacc
ttcacgcctgacctgaatatatttcaagacgtcatgcataaagacactttggtgaagtct
tttatagatgaggtgttcatgctgaagcccggcctgtccctgcggagcacctacctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacatcgaggacgaa
acgcaaaaagggaagaagccctttaaatccctgcgcaacctgaagacggacctggatctg
acggtggagggggacctgaacatcgtcatggccttcgctgagaagctgagggcggggcta
cactcgttcgtgttcgggaagcctttctacaccagcatgcaggaacgagacgtgctcatg
agcttctga
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