Anoplopoma fimbria (sablefish): 129103462
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Entry
129103462 CDS
T09102
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129103462 (exd2)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
129103462 (exd2)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129103462 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
129103462
NCBI-ProteinID:
XP_054469925
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All DBs
Position
15:complement(3001944..3011815)
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AA seq
637 aa
AA seq
DB search
MSHRGPLTAVITVLGVTLGGLLIWRVYRTKRKRLPSVQKAVDPAEAPCPVEKDFTAVEHR
NNQPPRLLEKEFKAVECQTTQQPPPVQMPSSEQLMAVKPVMVSSEEEWQQLWPLMQQELS
VFPVLGLDCEWVKNKGVSVKGRTSAVSLLQMATYSGLCVLVRLLAFRGGQQPFPLSLMEV
LRDPHILKVGVGCYEDGKRLTRDYGLSLTCTVDLRYLALRQRQAPVNNGLSLKSLAEDLL
NVSLDKSLELRCSDWEADQLTPKQMTYAARDAQVSIALFLHLLGLDSPSGGSYSELAARC
QGLVDVPFKSRGDGDDRASDGERRRKTWKTPTFESPESGDQQVPDPRKNNKRKPLGVGYS
ARKSPLYDNCFLHAPDGQPLCTCDKKKAKWYLDKGIGVLQSEEPFVVRLLFEPSGRPDSQ
QDYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDILLLCTSCHAASNV
HDGFLKQRLAEEFAAPQGCEEGVRLLEDSDRRRVRSAARALLTAGEGLPEQRREELQGLI
KSYLDADEEQELTEEALQEAAGLETRIFNEAYVPHGLKVVRASAERGLQGLMELERRWRQ
HFLAAMQPRHLPPLWAIDHNHSKFLRKYGEDLPIKLN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcgggggcctttaaccgctgtcataacagtactaggagtgaccttaggcggg
ctgctcatatggcgagtttaccgaacaaaaaggaagcggctgccttccgtccagaaggcg
gtcgatcctgcggaggctccgtgtcctgtggagaaggacttcacggctgtggagcatcga
aacaaccaaccgccacgtctcctggagaaggagttcaaggctgtggagtgtcagaccaca
cagcagcctccacccgtacagatgccgtcctctgaacagctgatggcggtgaaaccggtg
atggtgagctccgaggaggaatggcagcagctgtggcctctgatgcaacaggagctgtcg
gtgttccccgtgctggggctcgactgtgaatgggtaaagaacaaaggcgtgtctgtgaag
ggtcgaacctctgcggtctccctgttacagatggccacatattcgggtctgtgtgtgctg
gtgaggctgctggcgtttcgcggcggccagcagccgttccctctcagcctaatggaagtc
ctgagggacccgcacatcctgaaggtcggcgtcggatgttatgaagatggaaagcggctg
acgcgagactacggtctgtcgctgacgtgcacggttgacctgcgctaccttgccttaaga
caaaggcaagctccagtgaataacggcctcagcctgaagtctctggcagaagatctgttg
aacgtgtctctagataaatccctggagctgcgctgcagcgactgggaggcggatcaactg
acgccgaagcagatgacctacgctgccagagatgcccaagtctccatcgctctcttcctc
catctcctcggcctcgactctcccagcgggggctcttactccgagctggccgcccgctgt
cagggcctggtggacgtgcccttcaagagccgtggagacggagacgacagggcgtccgac
ggagagaggaggcggaagacgtggaaaacgcccacttttgaaagcccggagtctggagat
cagcaagtcccagacccccgaaagaacaacaagaggaaaccgctgggtgtgggctattcc
gccaggaagtctcctctctatgataactgcttcctccacgctcctgacggccagccgctg
tgcacctgcgacaagaagaaagccaaatggtacctagataaaggaataggagtgctccag
agcgaagagcctttcgtagtgcggctgctgtttgagccgtcgggacgtcccgactcccaa
caggactattatctcaccgcgaaggagaatctctgcgtggtctgcggcaaagcagattcc
tacatcaggaaaaacatagtgccgcatgagtacaggcggcactttcccaccgagatgaag
gaccacaactcccacgacatcctgctgctctgcaccagctgccacgccgcctccaacgtg
cacgacggcttcctgaagcagcgtttggccgaggagttcgccgcccctcagggctgcgag
gagggcgtccgcctgctggaggactcggaccgacggcgggtgcgttcggcggctcgggct
ctgctcaccgccggggagggactgccggagcagcgacgagaagagctgcagggtttgatc
aagagttacctcgacgccgacgaggagcaggagctgacggaggaggcgctgcaggaggcc
gccggtctggagacgaggattttcaacgaggcctacgtgcctcacggtctgaaggtggtg
cgtgccagcgccgagcggggccttcagggcctgatggagctggagcgccgctggaggcag
cacttcctcgcggccatgcagccgcgccacctccctccgctctgggccatcgaccacaac
cacagcaagttcctccgcaaatacggagaggacctgcccatcaaactcaactga
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