Anoplopoma fimbria (sablefish): 129104510
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Entry
129104510 CDS
T09102
Symbol
cxcr4b
Name
(RefSeq) C-X-C chemokine receptor type 4b
KO
K04189
C-X-C chemokine receptor type 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03250
Viral life cycle - HIV-1
afb03260
Virion - Human immunodeficiency virus
afb04020
Calcium signaling pathway
afb04060
Cytokine-cytokine receptor interaction
afb04144
Endocytosis
afb04672
Intestinal immune network for IgA production
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129104510 (cxcr4b)
03260 Virion - Human immunodeficiency virus
129104510 (cxcr4b)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129104510 (cxcr4b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129104510 (cxcr4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129104510 (cxcr4b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
129104510 (cxcr4b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
129104510 (cxcr4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
afb04030
]
129104510 (cxcr4b)
04050 Cytokine receptors [BR:
afb04050
]
129104510 (cxcr4b)
04090 CD molecules [BR:
afb04090
]
129104510 (cxcr4b)
G protein-coupled receptors [BR:
afb04030
]
Rhodopsin family
Chemokine
CXC Chemokine
129104510 (cxcr4b)
Cytokine receptors [BR:
afb04050
]
Chemokine receptors
CXC Chemokine
129104510 (cxcr4b)
CD molecules [BR:
afb04090
]
Proteins
129104510 (cxcr4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
129104510
NCBI-ProteinID:
XP_054471202
LinkDB
All DBs
Position
16:complement(17813316..17815421)
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AA seq
379 aa
AA seq
DB search
MDNMELDISFDFFDNSTDNISEESGEFGMDFPEPCGRALSNDFNKIFLPTVYGIIFILGI
IGNGLVVIVMGYQKKVKTMTDKYRLHLSVADLLFVLTLPFWAVDAAKNWYFGGFLCVSVH
MIYTVNLYSSVLILAFISLDRYLAVVRATNSQATRKLLASKVIYVGVWLPAAVLTVPDLV
FARVQNTGSSNYPFLDESIETADSRIICQRIYPQMHNAIWTVVFRFQHILVGFVLPGLVI
LICYCIIIARLSQGSKGQALKRKALKTTIILILCFFSCWLPYCVGIFLDNLMMLNAFSFS
CNLQQAVERWISITEALAYFHCCLNPILYAFLGVKFKKSARIALTASSRSSQKVTLMTKK
RGAISSVSTESESSSVLSS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatggagcttgacatttcattcgacttcttcgacaacagtactgacaacatc
tcagaggagtctggagaatttggcatggacttcccagagccatgtggcagagcgctcagc
aacgacttcaacaagatcttcctgccgacagtttacgggattatattcattctgggcatc
attggcaatggattagtggttattgtcatgggctatcagaaaaaggtcaaaaccatgacg
gacaagtaccggctccatctctctgtggcggacctcctgttcgtcctcacgctgcccttc
tgggctgtggatgcagccaagaactggtactttgggggtttcctctgtgtgtccgtgcac
atgatctacacagtgaacctgtacagcagcgttttgatcctggccttcatcagtctggac
agatacttggcagttgtgcgagccaccaacagccaagccacgaggaagctgcttgcaagc
aaagtgatctatgttggtgtgtggctgcctgcggctgtactgactgtgcctgacctggtg
tttgccagggtgcaaaacacgggctcttcaaactacccctttttagacgaaagcatcgag
acggcagactccaggatcatctgccagcgcatctacccgcaaatgcacaatgccatttgg
acagttgtttttcgcttccagcacatcctggtgggcttcgtactgcccggtctggtcatc
ctcatctgctactgcatcatcatcgccaggctgtcgcaaggctccaagggccaggctctg
aagaggaaagcgctgaagaccacgatcatcctcatcctttgttttttctcctgctggctg
ccctactgtgttggcatctttttggacaacctgatgatgctgaatgcgttctctttctct
tgtaacctgcaacaagcggtggagaggtggatttctatcacagaggcgctggcctatttt
cactgctgccttaaccccatcctctatgctttcctgggagtgaagttcaagaaatcagcc
aggattgcactgacagccagcagcagatcaagtcagaaagtaactctcatgaccaaaaag
cgaggagcaatttcatccgtgtcaactgagtccgagtcctcaagtgttttgtcaagttaa
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