Anoplopoma fimbria (sablefish): 129105363
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Entry
129105363 CDS
T09102
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129105363 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129105363 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129105363 (iars1)
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
129105363 (iars1)
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129105363 (iars1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129105363 (iars1)
Prokaryotic type
Other AARSs
129105363 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
PriX
Motif
Other DBs
NCBI-GeneID:
129105363
NCBI-ProteinID:
XP_054472315
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All DBs
Position
17:complement(19151525..19200716)
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AA seq
1268 aa
AA seq
DB search
MVERVPESINFPSEEEKILQFWQKNDCFLECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNQQC
RNIVMRYSGEWETSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
YSTACSTPLSNFESNQNYKDVQDPSVIVSFPLVGNEDVALIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNVTGKTYILMEARLGALFKSESEYTLLDKFAGKTLKGKKYLPLFQYFAKCG
EEGAFQVVTDNYVKEEDGTGVVHQAPYFGADDFRVCTEYKIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKMLKEMGRLVNASTFKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLANNDKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPIWVSDDFEEVVC
IGSIAELEELTGVRVTDLHRESIDDLTIPSRCGKGVLRRITEVFDCWFESGSMPYAQAHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQQYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYHLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLINPVSVEEKDSSSIHYLMLPQLRESLIDKRIESAVCQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLEKYILDELNVRQLTMSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAITASIKELTSEQLEAFQKTGSINVDGHELHEEDLRLMYTFDQSSGSAAQ
YEAHSDAQVLVLLDVSPDQSMMDEGVAREVINRIQKLRKKGHLVPSDEITVYYRCQPEGE
YLGSVIQAHTDFILATTKAPLLPFPIPKTASVIIEEKTQLKGSDLELTIVKGSSAPRAPL
NGPACTYVNVRVKVNNKEQEGVVLLENPKGDNRLDLDKLKKVCSSIFGTNKTQLRFFNGG
TELTSKMDLQALSGKTLSVTSGSSSPDQAPPSDTLLCPYVNLLLCDTQPAECQTGEVGTL
LLVNPVGQNGLNYSGLLSEAAKVFGLRSRRLKLYLDQDLTQELPADSSVKSLDTKTLFVR
VLSTTAEA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcgagtccctgagtccatcaactttccctcagaggaggagaagatcctgcag
ttctggcaaaaaaacgactgcttcctggaatgcctgaaacagtccaagaaccggcccaag
tacaccttctacgatggtcctccgtttgccacgggtctaccccactatgggcacatcctg
gccggcaccataaaggacattgttactcgctttgctcaccagagcggcttccatgtggac
cgccgctttggctgggactgtcacggcctacctgtggaatatgagattgataagactttg
gggatcaaagggcctgaagatgtggccaagatgggcattgctgagtacaaccagcagtgc
agaaacattgtcatgagatactccggcgagtgggagacttcagtgaggcgaatgggaagg
tggattgacttcaagaacgactacaagactctctacccgtggttcatggagactgtctgg
tgggtgttcaaacagctttacgacaagggtttggtctaccgaggtgtcaaagtcatgcct
tactccactgcctgcagcactcccctgtccaactttgagtccaaccagaactacaaggat
gtacaggacccatctgtgattgtcagcttcccattggtcgggaatgaggacgtggctttg
atcgcctggacgacaacaccctggacactgcccagcaacctggccctctgtgtgaacccg
gagttcttatacgtcaaggtcaaagacaacgtcacagggaagacctacattttgatggag
gccaggctgggagctctgtttaagtctgagagcgagtacactctcctggacaaatttgcc
ggcaagacgctgaaagggaaaaaatacctgcctctattccagtactttgccaagtgtggg
gaggaaggagccttccaggtggtgacggataactatgtcaaggaggaagatggcacagga
gtggtccaccaggcaccttactttggagctgatgatttcagagtgtgcaccgaatacaag
atcatccagagggaccaggctcctatctgccctgtggacgcctcgggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagatgccgacaaaaatatcatcaagatg
ctgaaggagatgggtcgtctcgtcaatgccagcactttcaaacataattaccccttctgc
tggaggtccgacacgcctctgatctacaaagccgtccccagctggtttgttcgagtggag
cacatggtggacaaactactggccaacaacgacaaatgctactgggttccagagtttgtg
cgtgagaagcgtttcggaaactggctgagagacgcaagagactgggcgatttccaggaac
cgttactggggaacaccgatccctatctgggtcagcgacgactttgaggaggtggtgtgt
atagggtccattgctgaactggaggaactgaccggagtcagagtaactgatctgcatcgg
gagagcatcgacgatctgacaatcccgtctcggtgtggtaagggcgtgctgcggaggatc
acagaggtgttcgactgctggtttgagagcggcagcatgccttacgcccaggcccactac
ccctttgagaacaggaaggagtttgaggacactttcccagcagacttcatcgctgaaggc
attgaccagacgaggggatggttctacaccttgctggtgctctccacagccctgtttggc
agaccgcccttcaagaatgtcattgttaacggattggtgctcgctagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccaggactgatagtgcagcaatatggagct
gatgccctcagactgtacctcatcaactcccctgtagtgagagcagagaacctgcgtttc
aaagaggagggtgtgcgagacgtgttgaaggatgtcttcctgccgtggtataatgcctat
cgcttcctggtacagaacgtacaaaggttacagaaggaggatgagattcagttcctgtac
aatgaaaacacagcgaagcagagtgacaacatcatggacaaatggattcagtcctttaca
cagtccctcatccagttcttcaaggccgagatggacgcttaccacctgtacaccgtcgtg
cctcgcctggtcaagtttgtggacatgctcaccaactggtatgtgaggaccaacagacgc
cgtctaaagggggagagtggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctcccttcacacccttcattacagagatgatg
taccaaaatctgcgtcacctcatcaatcccgtctcggttgaagagaaggacagcagcagc
atccactatctcatgctgccccaactcagagagagtctgatcgacaagcgcatcgagagc
gccgtctgtcagatgcagtctgtgatcgagctgggccgagtgatccgagacaggaagact
ctgcccgttaagtacccattaaaggaggtggtagttattcaccaggacccagaagctctg
aaagacattcagtccctggagaaatacatcctggatgagcttaatgtgcgacagttgaca
atgtcaacggacaaggacaagtacgggatccgtctgagagccgagccagaccacatggtg
ctgggcaagagactgaagggggccttcaaagctatcactgcttctatcaaggagctcacc
agcgaacagctagaggccttccagaagacaggatccatcaatgtggacggccatgagctt
catgaggaggacctgagactcatgtacaccttcgaccagagctctggctcagcagcacag
tatgaagcacactctgatgctcaggttctcgtgctgttggatgtcagcccggaccagtcc
atgatggatgaaggcgtcgcccgagaggtcatcaaccgcattcagaaactacgcaagaag
ggtcatttggtgccatcagatgagattactgtgtactaccgctgccagccagagggagag
tacctgggctctgtgatccaggctcacactgactttattctggctaccaccaaggctcca
ctgctgcccttccccatccccaagaccgccagcgtcatcatagaggaaaagactcagctg
aagggctcagacctggagttgaccatagtaaagggctcttcagcccctcgggctccttta
aatggaccagcttgcacctatgtgaacgtcagggtgaaggtcaacaacaaagaacaagaa
ggagtggtgctgctggagaacccgaaaggcgataacagactcgacttggacaagctgaag
aaagtgtgcagcagcatctttggaaccaataaaacccaactcagattcttcaacggcggg
actgagttgaccagtaaaatggaccttcaggctttgagcggtaaaacgctgtcagtgact
tcaggctcctcctcccctgaccaagccccgcccagcgataccctcctgtgtccttacgtt
aacctgctgctctgcgacacacagccagctgaatgccagacaggagaggtgggcaccctc
ctgctggtgaatccagtgggtcagaatgggctcaactactcaggcctgctgtctgaggct
gccaaggtgttcgggctccgcagcagacggctgaaactctacctggaccaggacctcacc
caggaactgccagccgattcatcggtaaaatctctcgacaccaaaactctgtttgtgcga
gttctttcaacaactgccgaggcataa
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