Anoplopoma fimbria (sablefish): 129106298
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Entry
129106298 CDS
T09102
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129106298 (pkp1b)
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
129106298 (pkp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Ish1
Motif
Other DBs
NCBI-GeneID:
129106298
NCBI-ProteinID:
XP_054473657
LinkDB
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Position
17:22642335..22652488
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AA seq
733 aa
AA seq
DB search
MSLDPMKSAISIGNVDDTSLALPSVHQYRSGQQRVLEQVQTIRRTKSRTSSSRSGSTSLS
PTSPLYDFVFIDTSKSQSQSNASNGALFFGNGISKSLSLEKNANRQSVINNNRSSVKLSS
ASTYQSKRGYAPVASVAAGPANTSRSDSDLVWQRSMQQRSAPPKMFFSTMGTYRTPERVT
TQFVTNTASQPQLQSVHTVNGTGQIKTNNQFIGSQVKVTKTVPKSPVTESAPKSKGDPGS
NNNNGVVDITMKEAVEYLSNEDETYQHCGASYIQHNAFIDDKAKEEVLKLKGIHPLVGLL
RSSSSQVSQTASAALRNLSFKSNDNKEKIHHSGGITEATALLRDTDSVEIQKQLTGLLWN
LSSVESLKPDLLKSALPVLMERAILPYTTGPDRSSSNSQDPEVFFNATGCLRNLSSTKQS
NRQAMRKCRGLVDSMVSYVKDCVDAGKPDDKSVENCVCVLHNLTFQLEAEAPALFSRITT
LAKAVNGGHSQGDTGPIGCFSPQGKSSEHERHFDFPVVEDPQPSGAGHLIHSKTLQSYLS
LLGTSQQEETQDACCGAMQNLTANESIVAGVMSQTIVQKLNGLQFISPLLKSEKINIQKN
AVALVGNLTKNPNLQNAIGRKALPELLGILSTGTKEGNESDDTLAMACQTSRCLLMKEPE
MGKQLLNNNLINSLKVLSLKEYLPKTSKAASVLLYNLWSEKDLQSFLKKQGMNKSTFVND
ITTAAHKSVQVVD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggatcccatgaaatcggccatttccatcggcaatgtggacgacacgtctctg
gccctgccgtccgtccaccagtaccggtcaggacaacagcgagtcctggaacaagtgcag
actatccggaggaccaagtccaggacgtccagcagcaggagcggatccacttctttatct
ccaacatctcctctgtatgacttcgttttcatagacacttcaaagtcacagtcacagtcc
aacgcgtctaatggagccctcttcttcgggaatggcatttctaaatctctcagcctagag
aaaaacgccaaccgtcagtcagtcatcaacaataatcgatccagtgtgaagctgagctca
gcttccacctatcagtccaagaggggatacgcccccgtcgcctccgtggcggccggtcca
gccaacaccagccgcagcgactctgatctggtctggcagcgctccatgcaacagcgctcg
gctcctccgaagatgttcttttccaccatgggcacctacaggacaccggagagggtcacc
actcagtttgtaacaaacaccgcatcccagcctcagctgcagtctgtgcacacagtgaat
ggcacaggtcagatcaaaacaaacaaccagtttattggcagccaagttaaagtgaccaaa
acagtcccgaagtctcccgtcactgagagtgctccgaagagcaaaggagatcctgggtca
aacaacaacaatggcgttgttgatatcactatgaaggaggctgttgagtatctttccaac
gaggatgagacgtatcagcactgtggcgcttcctacatacagcacaatgccttcatcgac
gacaaggctaaagaggaggtgttgaagctcaaagggatccatcctttggtgggtctgctg
cgcagctccagctcccaggtcagccagacagcctcggccgccctccgtaacctgtccttt
aagagcaacgataacaaggaaaagatccatcactcgggcggcatcacggaggccacggct
ctgctcagagatacggactctgtcgagatacagaaacagctgacaggtctcctgtggaat
ttgtcctcagtagaaagcttgaagccagacctgctgaagagtgctctgccagtcttaatg
gagcgtgcgatcctgccgtacacaacaggtccagaccggagcagcagtaacagccaggac
cctgaggtcttcttcaacgccaccggatgtctaagaaatttaagcagcacgaagcaaagc
aacaggcaggcgatgagaaaatgtcgaggtttggtggactccatggtcagttatgttaaa
gactgcgtggatgcaggaaaacccgatgataagtcggtggaaaactgcgtgtgcgtcctg
cacaacctgaccttccagctggaggccgaggctccggctctgttcagcaggatcacaacg
ctggccaaggctgtcaacgggggccacagccagggagacaccggccccatcggctgcttc
agtccacagggcaaatcctcagagcacgagcgtcactttgacttcccggtcgttgaggat
ccacaacctagtggagccggtcacctgatccactccaaaactctgcagagttacctgtct
ctgcttgggaccagccagcaagaagaaacacaggatgcctgttgtggagccatgcagaac
ctcaccgcaaacgaaagcattgttgccggtgtaatgagccagaccattgtgcagaaactg
aatggtctgcaatttatcagtccccttttaaaatcagagaaaatcaacatccagaagaat
gcagtggctttggtaggaaacctgaccaaaaacccaaacttgcagaacgccataggtcgt
aaagccctcccagagctcctgggcatcctcagcacaggcaccaaggaaggaaacgagtct
gatgacacactggccatggcctgccagacttcgcgttgcctgcttatgaaggaacctgag
atgggcaagcaactgttgaacaacaacctgatcaactccctgaaagttctcagcctaaaa
gaatatttacccaagaccagcaaagctgcgtccgtgcttctctacaacctgtggtcagaa
aaagatttacaaagcttcctgaaaaagcaggggatgaacaagtccacgtttgtgaatgac
atcaccacggcagcacacaagtcggttcaagttgtcgattaa
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