Anoplopoma fimbria (sablefish): 129107081
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Entry
129107081 CDS
T09102
Symbol
ncoa1
Name
(RefSeq) nuclear receptor coactivator 1
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129107081 (ncoa1)
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
129107081 (ncoa1)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
129107081 (ncoa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
PAS
SRC-1
PAS_9
PAS_3
Motif
Other DBs
NCBI-GeneID:
129107081
NCBI-ProteinID:
XP_054474422
LinkDB
All DBs
Position
18:16787822..16832998
Genome browser
AA seq
1509 aa
AA seq
DB search
MSAVGENPLDPATPESRKRKGSPCDTSGQSVEKRRRELECRYIEELAELLSSNMGDIASL
SVKPDKCHILKSTVDQIQQLKRRKQEKAALLSPDDEVQKSDISSSSQGLVEKEALGPMLL
EALDGFFFVVNREGRIVFVSENVTSYLGYGQGELMTSSVYSILHVGDHNEFVRNLLPKSL
VNGVPWPQEPGRRNSHTFNCRMLKRPPDELDSENPEARQQYEIMQCFTVSQPRTMQEEGE
DLQSCLICIACRIPRAQPFSTESFITKQDPTGKIISIETSALRATGRPGWEDLVRKCIYA
FFQTQGKEPSHAKKLLHEVMTHGTAISPLYHFMLSDGTPLSAQTRCKFCCPPNPDVQPFI
MGIHTIDREHNTASSQENTNPSLPPTLGSLAQAPSRSPSLPPGSNWTQGSGLSTSGLHPN
NTNTSPHGQNPATPTGYLTPNRTCTQQVNSPSPLSSPLTATPTSFMSPRMQRASPGSGGS
PRVPGNPFSPSTPGLHSPAGELSSGGSLNRQQSGGDGGSGASGGSTGSFSLSSPVLQRQA
STPTDPSTRPPSAKPPEGGEGGGEDSAKVPLPSASQLGNPRLNQLLESNGTGVESNNNRI
HCTSSPHPPNPHPAPQCPAAHSTLTQRHKILHRLLQDTSPSDASNTTEEGLNKNDVEIKR
EPPASPALTAAPPKSSSREPQDHQLLRFLLDTDEKDLGDLPPPSALSLQTVRVKVEKRAS
VDGVACAGSTVAAGGSSKPAGVCTSSACVSPKSSPVGENRRDSRRDSRDSTTSGGPVDMD
PLTQLLPGLRGPSGAKQSSEDSTTAGGGPQLHSPASQPPAQLQSPQSQLQSPLSQPQSLS
QLQSPSPQLHSPSPQLKLQSPTQLQPGETSTSRNVNVKREPPGTPNRGISDGGAPSGCSL
QSQSTFDFCSPPTPSQTQNQGQGESFQTPKDSSLFPEAEVNNPFSSSTGLSKMDVGDSQF
QPLSLSLSDTLSFDGLGTPLQAPLASPQEQCVPCTLDEVLGPPTTPEGRNDEKALLEQLV
SFLSGTDESELAELDKALGIDKLVQGGCFDLLPQTFPTQQSTATPGSMDPKLPTYPSQFT
PTPQAQFTPELAAVVGQQGLGFGAPRGAFPGGTTGIGLRPGMPRPQGIGTQLRLPPNQLR
LQLQQRLQGPQQLQNRMAGMNLFPGGAQHVNLGLRQGVQQPQMPSQQPPLNAQMLAQRQR
ELFSIQHRQRQLFQQKVMLMRQNMAGAPTGAAGPTGTARVPKGPPSTPQQQQQQQQQQFN
FPPGYNPLTGKSPTSTSHFSPMTGGPLDSKLPVRVPLNNQALMAGVQGQFSSTVSSTLPQ
GLFQQFGGSAIAQQDPSFPADMSPTSPLLSPQNTTSQSPLLQQAPPPGYQSPEMKSWQQT
GMGSNSLFSQSGQSAGQAFGQQGVYNNMSITVSMAGGSGGVGSLSPMGQPVGMSNSNLSN
VGSVCSDQQVQQVQVFADVQCTVNLVGGESYLNQGSIGAAASQKGPGVPQGPQNNQAQQK
SLLQQLLTE
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtaggggaaaaccccctggaccctgccacgccagagtcacgcaagaggaag
ggctcaccatgtgacacatcagggcaaagtgtggagaagcggagacgggagctggagtgc
cgctacatcgaggagctggctgagctgctgtcatccaacatgggcgacattgccagtctc
agtgtcaagcccgacaagtgccacatcctcaagagtacggtggaccaaatccagcagttg
aaacggcgtaagcaggagaaagcagctcttctgtctccagatgatgaggtgcagaagagc
gacatctcctccagtagccaggggctggtggagaaagaggcgctgggtcccatgctgctt
gaggcccttgatgggttcttcttcgtcgtcaaccgggagggccgcattgtctttgtttcg
gagaacgtgacgagttacctcggatacggccagggggagctgatgacctccagtgtctac
agcattctccatgtgggagaccacaatgaatttgttcgcaatctgctgcccaaaagcctg
gtaaacggcgtgccgtggccacaggaacctggacgaaggaacagccacacctttaactgt
cgcatgctgaagaggccgccggacgagctggattcagaaaatccggaggcccggcagcaa
tatgagatcatgcagtgtttcaccgtgtcccaaccacgaaccatgcaggaggagggagaa
gacctgcagagctgcctgatctgtattgcctgtcggatacctcgcgcccagcctttcagc
actgagtctttcatcacgaagcaggaccccacagggaagatcatctctatagaaaccagt
gctttgcgggcgacaggccggcctggctgggaggacctggtcaggaagtgcatttacgcc
ttctttcagacgcagggcaaagagccctcccacgccaagaagctgctgcatgaggtgatg
acccacggcaccgccatcagcccgttgtaccatttcatgttaagtgatggcaccccgctc
agcgctcagacccgctgcaagttctgctgcccacccaaccctgacgttcagcccttcatt
atgggcattcacactattgacagggaacacaacactgctagctctcaggaaaacactaac
cccagccttccaccgacccttggcagtcttgcccaggctccctcccgctccccttccctt
cctcccggcagcaactggacccaaggctcaggcctctccacctcgggccttcaccccaac
aacaccaacacctccccccacggacaaaatccagccacacccacaggctacctgacaccc
aatcggacctgtacccagcaggtcaacagcccctcccccttgagcagcccactcacagcc
acccctacctcttttatgtcacccaggatgcaacgagccagtcctgggtcaggtggcagc
cctcgggtacctgggaaccccttctctccttccacaccaggcctccactccccagccggg
gaactgagtagtggaggcagcctcaacaggcagcagtctggtggtgatggtggtagcggc
gccagcggtgggtcaacggggtccttctccctgtcctctcctgtccttcagagacaagcc
agtacacccaccgatccctctactcggccgccatctgcaaaaccgccagagggaggagaa
ggagggggagaggactctgctaaagtacctcttccttctgcctcacagctgggtaacccc
agactcaatcagctcctggaaagcaatgggacaggagttgagtccaacaacaacagaatc
cactgcacctcatcacctcatcctccaaaccctcatcctgcccctcagtgccctgccgct
cacagtactctgacacagcggcataagatcctgcaccggctgctccaggacaccagtccc
agcgatgcctcgaacaccaccgaggaaggactaaacaaaaacgacgttgagatcaagagg
gagccgcctgctagtccggctctgaccgcagcacctccaaagtccagctccagagagcca
caggaccatcaactactccgatttctcctggacacagacgaaaaggacttgggggacctg
ccacctccatctgctctcagcctgcagacagtgagggtaaaagtggagaagagagccagc
gtggatggagtggcctgtgctggctccaccgttgcagcaggaggttcgtccaaacctgcg
ggagtgtgcaccagctcagcatgcgtcagcccaaaatccagccccgtcggagagaaccgc
cgagacagtcgcagggacagccgagactccacgacgtccggtggccctgttgacatggac
cctctcacccagctgctgcctggcctgagaggcccaagtggggccaaacagagcagcgag
gattcaacgaccgctggaggaggcccacaactccactctccggcctcccagcccccagct
caactccagtccccccagtcacagctccagtcccccctgtcccagccccagtccctttcc
cagttgcaatctccgtcgccccagctccactccccttctccccagctcaaactgcagtcc
cccactcagctccagcctggcgagaccagcacttctcgcaacgtaaatgtgaagagagag
cctcctggtactcctaatagaggaatcagtgatggcggcgcaccctccggctgcagcctc
cagagtcagtcaacctttgatttctgcagcccccctactccaagccagacccagaaccag
ggccagggagagtccttccagacccccaaagacagcagcctcttcccagaggcagaagtt
aacaaccctttcagttcaagcactggcctatccaagatggatgtgggagactctcagttc
cagcctctgtctctgtctctgtctgacaccttgtcctttgatggtcttggaacaccttta
caagctcccttggcatcaccacaagagcagtgtgtgccctgtacgctggatgaagtgctg
ggccctccgaccacacccgagggccggaacgatgagaaagctctgttagagcagctcgtc
tccttcctcagtgggactgatgagagtgaactggctgagctggataaggccctgggtatt
gacaaactggtgcagggtggctgttttgacctattgccacaaaccttcccaacacagcaa
tccactgccaccccaggttccatggaccctaaacttcccacgtacccgtcgcaatttaca
ccaaccccacaagctcagtttactccagagctggccgcggtggtggggcaacagggtctt
gggtttggagccccccggggggctttccccggcgggacgacaggcatagggctgaggccg
ggcatgccgcgaccgcaggggattggcactcaactcagactgccacccaaccaactgagg
ctgcagctgcagcagaggctacagggcccacagcagctccagaacaggatggcgggcatg
aatttgtttcctggaggagcccagcatgtgaacctagggctccgtcagggggttcaacaa
cctcaaatgccctcacagcagcctccgctgaatgcccagatgctggcccagcggcagagg
gaactcttcagcatccagcaccgccagcgccagcttttccagcagaaggtcatgctgatg
agacagaacatggcaggtgctccgaccggagctgcggggcccaccggaacagccagagtc
ccaaaaggtccaccatcaacacctcaacaacaacaacaacaacaacagcagcagttcaac
ttcccaccagggtacaatcctttgacgggaaaatcccctacctcaacgagtcacttcagc
cccatgaccgggggccctctggacagcaaactgcccgtcagagtccccctgaataaccag
gcgctgatggccggcgtgcagggccagttcagcagcaccgtgagctctacactgccgcag
ggcctgtttcagcagttcggagggtctgctatcgcccagcaagacccatctttccctgct
gacatgagcccgacaagcccattgttgtcacctcaaaacaccacctcccagagtcctttg
cttcaacaagccccaccccctggctaccagtcaccagaaatgaagagctggcaacagacc
ggcatgggaagcaacagcctgttcagtcagtcaggacagagtgcaggacaggcttttggc
cagcagggggtttacaacaacatgagcatcaccgtctccatggccgggggctcgggtggt
gtcggctcattatctcccatggggcagccggttggcatgagcaacagtaacctcagcaac
gtcggttcggtgtgtagcgaccagcaggtgcagcaggttcaggtgttcgcggacgtccag
tgcacggtgaacctggtcggtggggaatcctacctgaaccagggctccatcggagcagca
gcctcccagaagggccccggcgtgccgcagggcccccagaacaaccaggcccagcagaag
agcctcctccagcagctgctcacggagtga
DBGET
integrated database retrieval system
