Anoplopoma fimbria (sablefish): 129108207
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Entry
129108207 CDS
T09102
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129108207 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
afb03310
]
129108207 (nr1h4)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129108207 (nr1h4)
Nuclear receptors [BR:
afb03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
129108207 (nr1h4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
129108207
NCBI-ProteinID:
XP_054475886
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Position
19:5582700..5595957
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AA seq
493 aa
AA seq
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MNEWVGPDINVVGPLHIPPSDEFSISESSHLFDILADQGSPLLQDPDILPFTGYPSMQYS
SMEPTMSSTPYYSSQNYYPQYHGDEWYSHTGIYELRKGPLEVGYDAEMEEVSAVVPAVCK
RTRHMSQAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAELKPSSPLAGLLTEIQCKSKRLRKNTKASPGQSTGD
ETEGADNTENKQVSSTSKLSKEKVEITKEQRALMKAIVDAYNRHQIPQDVAKKLLQEQYS
AEENFLLLTEMATSQVQVLVEFTKNIPGFLSLDREDQIALLKGSAVEAMFLRSAQVFSRK
MPNGHSDVLEERIRKSGIPDEFMTPMFNFYKSIGELHMVQEEQAILTAITILTPDRPYVK
DHQAVEGLQETMLDVLRKLCVLQHRQEPQYFARLLGRLTELRTLSHYHAEMLSSWRMNDH
KFTPLLCEIWDVQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccccgacatcaatgtggtgggaccgctacatatcccacccagc
gatgaattctccatctcagaaagctcccacttgtttgatatcctggcagatcaaggcagt
cctctcctgcaggatcccgatatcttacccttcactggctatcccagcatgcagtattcg
tccatggagccaaccatgtcttccacaccatactactccagtcagaactactaccctcag
taccatggagacgaatggtactcacacacggggatatatgaactgaggaagggacccctg
gaggtcggctatgatgctgagatggaggaggtgtccgctgtggtgcctgccgtgtgcaag
aggacccggcacatgtcgcaggctggaagggtcaaaggggaggaactgtgtgtggtgtgt
ggagacaaggcctctggataccactataacgctctcacctgtgagggatgtaaaggtttc
ttcagaagaagcataaccaagaacgctgtgtacaaatgcaagagtggcggtaactgtgaa
atggacatgtacatgcgcaggaaatgccaggagtgtcggctaagaaagtgcaaggagatg
ggcatgctggctgagttgaagccttcatcaccgctggcaggcctgctgacagagatccag
tgtaagtctaaaaggctgcggaagaacaccaaggcttccccggggcagtcgaccggagac
gagacagaaggggcagacaacacagaaaacaaacaggtctcctctacctccaaactgtca
aaggaaaaagtcgaaatcaccaaagagcagcgggctctcatgaaagccatcgtagatgct
tacaacagacatcaaattcctcaagacgtggcaaaaaaactgctgcaagaacagtacagt
gcagaggaaaacttcctcctattgacagaaatggcaacaagtcaagttcaagttttggtg
gaatttacaaaaaatattccaggctttctctctctggatcgtgaggatcagatcgctctg
ctaaagggctcggctgtagaggccatgtttctacgctcagctcaggttttcagcagaaag
atgcctaacggacactcagacgttttggaggagaggatacgaaagagtggtataccagat
gaattcatgacacccatgttcaacttttacaaaagcattggtgaactccacatggtgcag
gaggaacaggctatcctcactgccataacaatcctgacgccagatcggccttatgtgaag
gatcatcaggctgtcgaggggcttcaggagaccatgttggatgttctgaggaagctgtgt
gtcctgcagcaccgacaggagccgcagtactttgctcgtctcctgggccgtctgacggag
ctgagaacactcagtcactaccacgcagagatgctctcgtcctggagaatgaatgaccat
aaatttacgccgctgctctgtgagatctgggacgtgcagtga
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