Anoplopoma fimbria (sablefish): 129109052
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Entry
129109052 CDS
T09102
Symbol
arhgef1b
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 1b
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04270
Vascular smooth muscle contraction
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129109052 (arhgef1b)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129109052 (arhgef1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129109052 (arhgef1b)
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129109052 (arhgef1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
Motif
Other DBs
NCBI-GeneID:
129109052
NCBI-ProteinID:
XP_054476953
LinkDB
All DBs
Position
20:18979641..19020279
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AA seq
1000 aa
AA seq
DB search
MSIIGAEDEDFENDLNDVMDDQCPYFNHIELVKERPTHLLIFMQHVILQFDPAPLLCYLH
AELFRNLSAKETKKQFVEFYNTFLDKGAILRVVLPPNVAYELDRTRPDLLHEDTQRRYAY
EVQSLQAAEVAKQLEDFRQKRMMGMTPNEAELIDVENHYPTDRIPREMKEKSVAENLLDR
MSETQPSIVSDEEKCQSIFTAVAFFMKHLGVKTRAVDSKKSRGGFFRRQLVKNKKDESTK
TKPRGVFTGIPSWIAGNTDVKPKTEAEAEKEKVNPERKVSAPGRGSLTEPAAPFLNSRKS
CSSGSPSSVPGLEISDGSGNISTTISPESTQADGLSSNRLEPPTLSDGGDVSPIGXGRGL
TLGEPLSPMEIPTEENVEKESFDGPVVFPEGPGHSPTSPSPQLEEMEPRLLEFESDPPNW
RELAPPEGLSSLSKRETKRQEVINELFATEHAHVRMLSVLQMIFSKPLEREELLTSNELS
TIFPNLDEIIEMHYNFYENLKKLRLDDNFIVKSISTTMLSRFGGTEGEWFQKLTARFCSH
QSWALYQIKSRQKKEPRFNSFILEAESKPQCRRLQLKDIIPIEMQRLTKYPLLLENIAKN
TEDPTEKERIQQSADCCRKILNHVNEEVKLMENLLTLKDYQRRLDTSGLKPSNDLYTEYK
NIDLTQKKMLYEGPVTWRVTKEKAIEVQCVLLGDLLVLLQKQDDKMVLKCQSKSNIAVQE
GKQMLSPIIKLDSVFLREVATDRKAFYVIFTWDSGAQIYELVAQSLGERKIWTEVIKSAV
DDLKKSGAPMRLTLQPGSGGGALFSPSTLTAPLSPTENGGLKSSSDRDKDSLTDDKSSDP
RHRLIDFLSDKGFDLIGHSNSDQEKVAHSALDEVMSLKRLLVGSISLSEDSQPDGENGEE
HSERPSQETDSCHSTEESQATERGAEEENDNSCEKEGAVMKSEEERSISAPLVLSQERRE
EVYRRLHSLEEQLKRLQTVEEEHHRLQEALSKFSLEGGTF
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggctgaggacgaggatttcgagaatgatcttaatgatgtgatggac
gaccagtgcccgtacttcaaccacatagaactggtgaaggaacggccgacccacctgctg
atcttcatgcaacatgtcattctgcagtttgacccggcgccgctgctgtgttacctccat
gctgaactcttcaggaacctcagtgccaaagagaccaagaagcaatttgtggagttctac
aacactttcttggacaagggggcaattctcagagtcgtacttcctcctaatgtcgcctat
gaattggaccgaacacgtcctgatctgctccacgaggacacccaaaggcgttatgcttac
gaggttcagagcctgcaggctgctgaagtggccaaacagcttgaagatttcaggcagaag
aggatgatgggtatgacacccaacgaggctgagctcattgacgtggagaaccactatccc
accgaccgcatcccgagggagatgaaggagaaatctgtagctgagaacctgctggacagg
atgtccgagacacaaccttcaattgtctcagacgaggaaaaatgccaatccatcttcaca
gcggtggccttcttcatgaagcaccttggggtcaaaaccagggcagttgacagtaagaag
tccagaggagggttcttcaggagacagctggtaaagaataagaaggatgaatcgacaaag
acaaagcccagaggggtgtttactggcatccccagctggattgcaggcaacactgacgtc
aaacctaaaacggaggctgaagcggaaaaagagaaagtgaatccggagcgtaaggtttca
gctcccggcagaggctccttgaccgaacctgcagcccctttcctcaacagcaggaagtct
tgttccagcggaagcccctcctctgtgcctgggttagagatcagtgatgggtcaggcaac
atcagcaccaccatcagccccgagtctacacaagccgatggcctctcaagcaatcgctta
gagccaccgaccctgtcagacgggggtgatgtgtcccccatcggcnctggtagggggctg
accctcggggagcccctctcccctatggaaattcccacagaggaaaatgtggagaaagaa
agttttgatggaccagttgtatttcctgaagggcccggccactccccaaccagcccctct
ccacagctggaggagatggagccacgcctactggagtttgagtcggacccgcccaactgg
agagagctggcaccccctgaaggcctgtccagtctcagcaagagggagaccaagaggcag
gaggtcatcaatgagttgtttgcaactgagcatgcccatgtgcggatgctgagtgtcctt
cagatgatcttctccaagcctctggagagggaggagctcctgacctccaatgagttgtcc
accatctttccgaacctggacgagatcattgaaatgcactataacttctacgagaacctg
aagaaactgcgcttggatgacaacttcatagtcaaatctatcagcaccactatgctcagc
agatttggaggaacagagggggagtggttccagaaattgacagcccgcttctgcagtcac
cagtcgtgggccctgtaccagatcaagagcaggcagaagaaagagccacgcttcaactcc
ttcatactggaggcagagagtaagccccagtgccgcaggctgcagctcaaggacatcatt
cccatagagatgcagagactgaccaaatacccgttgctgctggagaatattgccaagaac
acagaggacccgacggagaaggagaggatccagcagagcgcagactgctgcagaaagatc
ctcaaccatgtcaacgaggaggtcaaattgatggagaacctattgactctgaaggactac
cagcgtagactggacacatcagggctcaaacccagtaatgacctttatacggaatataag
aacatcgacctaactcagaagaagatgctttatgaaggccctgtgacctggagagtcaca
aaggagaaggcaatcgaggtgcagtgtgtgttgctcggggacctgctggtgctcctacag
aagcaggacgacaagatggtcctcaaatgccagagcaagagtaacatcgcagtgcaggag
ggcaagcagatgctgagccccatcatcaagctggactcagtcttcctacgagaggtggcc
acagatcgaaaggccttctacgtgatatttacctgggacagcggtgctcagatctatgaa
ctggtggctcagtctcttggagagaggaaaatctggaccgaggtgataaagtcagcagtg
gatgatctgaagaagagtggagcacccatgaggttaacgctgcagcctggaagtggagga
ggagctctcttcagtccctccacgctgactgcccctttgagcccgactgagaatgggggt
ttgaaaagcagtagtgatcgagataaggacagcttgacggatgacaagtcttcagacccc
cggcacaggctgattgatttcctgtcagacaaaggcttcgacttgataggccactccaac
agcgatcaggagaaggtggcccacagtgctttggacgaagtcatgtctctgaagaggctg
ttggtcggcagcattagtctgtcagaagactcgcagcctgatggggaaaacggagaggag
cattcggagaggcccagtcaggaaacggatagctgtcattcaacagaagaaagccaggcc
acagagaggggagcagaggaggagaacgacaactcttgtgaaaaagaaggtgcagtgatg
aagagcgaggaggagaggagcatcagtgcgcccctggtgctgtcccaggagaggagggag
gaagtgtacaggaggctccacagtctggaggaacaactaaagaggctacagactgtagaa
gaggagcaccacaggctgcaggaggccctttccaagttctcactggaggggggcaccttc
tag
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