Anoplopoma fimbria (sablefish): 129109537
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Entry
129109537 CDS
T09102
Name
(RefSeq) T-cell surface glycoprotein CD4-like isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03250
Viral life cycle - HIV-1
afb03260
Virion - Human immunodeficiency virus
afb04060
Cytokine-cytokine receptor interaction
afb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129109537
03260 Virion - Human immunodeficiency virus
129109537
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129109537
04514 Cell adhesion molecules
129109537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
afb04090
]
129109537
CD molecules [BR:
afb04090
]
Proteins
129109537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
C2-set
Izumo-Ig
RIFIN
TMEM154
Orf78
DUF6249
DUF4381
Motif
Other DBs
NCBI-GeneID:
129109537
NCBI-ProteinID:
XP_054477603
LinkDB
All DBs
Position
20:17980434..17996474
Genome browser
AA seq
492 aa
AA seq
DB search
MRNVIQSVVLLLTTLMSTGAVEVIYAQVGETATLKPPVGTNLQECYVSWRLDNKEGHELA
GRNPFGKKTTTTSEAWNGRLSLSKDSLIIKDIRPEDFRTFVLEGTGDKCLLAAYVDIKLL
KLTVSVNPLSPLLPGDELSLSCDAQTLQGKKSPKIHWLNPSGGKTEKLVTVRATIQDNGH
WTCVVTNDSKENKAKVSVTVLGLYPAPLHPQYTSRSGPLTIPCSLLAHISWEQIKAKDIQ
EVHWHFVPEAGLSPQRLFSLSLEDPVTWKADQDRGLQPVPNPKKGNLSLTRNRGREDDKG
DYVCTLAFKNGATLNSTVRVEVLQIISSPGTELISGQQLNLTCGTGHPLPSDLHVKWVPP
KQSSLSSLTSDRHPAHLTIPEVGTGDGGKWRCELWQSNAQLTSAEITLKIEPKISVWMLV
VICSVTAIVILLLILVFILYRRRKQKMTLLRRRLCQCKTYVTTISWTHEITQDTHSQSSA
LKLLATRCFVEK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgtaattcaatctgtcgtcctcctcctgactacgctcatgtcaacaggggca
gtggaggtgatatatgctcaggtgggagagacggccacccttaagcctccagttggtact
aatttacaagagtgttatgtgtcctggaggttggataataaggagggccatgaactcgct
gggcgcaatcccttcggcaaaaagacgaccactacaagtgaagcctggaatggcaggttg
tccttgtctaaagactcactgatcatcaaagacatccgaccagaagactttaggactttt
gtccttgaaggcacaggtgacaagtgtctcttagcggcttacgtagacataaaactactc
aaacttaccgtgagtgtgaacccactctctcctctgctgcctggggacgagctgtctctg
tcctgcgacgcacagactcttcagggtaagaaaagccccaagatacactggctgaatccc
tcgggagggaaaactgaaaaacttgtcactgtgagagccacaattcaagacaatggccac
tggacttgtgttgtgacaaatgatagcaaagagaacaaggccaaagtttctgttactgtt
ttaggcctctacccagctcctttacatcctcagtatacgtccagatccgggcctctcacc
atcccctgttcccttcttgctcacatctcctgggaacaaatcaaagcgaaggacatccag
gaagttcactggcactttgtccctgaagcaggcttgagtccacagaggctcttctccctc
tcactggaagatccagtgacctggaaggccgaccaagacagaggactacaacctgtacca
aaccctaaaaaaggaaatctatctttgaccagaaatcgaggcagagaagacgacaaagga
gattatgtgtgcaccctggcatttaaaaatggtgcaactctgaacagtactgtgcgcgta
gaggtgctgcaaatcatctcctctccaggaacagagttaatttctggccagcagctcaac
ctgacttgcggcactggccatccgctgccctccgacctgcacgtgaaatgggttccgccc
aaacaatcgtccctgtcgtcgctgacatctgaccgccaccccgcccatctcaccatcccg
gaagtggggacaggagatggcggaaagtggagatgtgagctgtggcagagcaacgcacag
ctgacgtcggctgagataacgctgaagattgaacccaaaattagtgtctggatgctggtg
gtcatatgtagtgtcacagccatcgttatcctcctcctcatcctggtattcatcctctac
cgacgcagaaaacagaagatgacactcctcaggcgccgactctgccaatgcaaaacgtac
gtaacaaccatttcctggactcatgaaattactcaagacacacattcacagtcatcagca
ctgaaacttttagccacaaggtgttttgtggagaaataa
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