KEGG   Anoplopoma fimbria (sablefish): 129110247
Entry
129110247         CDS       T09102                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04145  Phagosome
afb04514  Cell adhesion molecules
afb04672  Intestinal immune network for IgA production
afb05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    129110247
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129110247
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    129110247
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129110247
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129110247
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129110247
  Exosomal proteins of epithelial cells
   129110247
  Exosomal proteins of breast milk
   129110247
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 ig I-set Sec3_C-term
Other DBs
NCBI-GeneID: 129110247
NCBI-ProteinID: XP_054478406
LinkDB
Position
20:complement(15459645..15464295)
AA seq 248 aa
MKTCSSGMKRLAFIILIINSFCVFSQIPHEFLVVAGCFENGTTESQFEFDSEEVLYVDFD
REEVVYSMPRFVIDDPSTLFENLHVYKNARKHKKTCSAFVAICKAEEKNPPEEMDPPESI
LYPSNEVQFGVANILICFVNHFYPPGIKVSWTRNGHLVSEGVSLSRYYPNNDQTFHQFTT
LTFTPKEGDIYSCTVEHLALDRPQTKIWEPDFRHRSLGPDVYCGVGLALGLLGVVAGTFL
MVKGHRRQ
NT seq 747 nt   +upstreamnt  +downstreamnt
atgaagacctgcagctcaggcatgaagcgcttggctttcataatcctgattatcaacagc
ttctgtgtcttttcgcaaattccccatgaatttctcgttgttgcgggctgctttgaaaat
gggacaactgaatctcagttcgagtttgattcagaggaggttttatacgtggattttgac
agagaggaggttgtttacagtatgccgagatttgttatagacgacccaagcacacttttt
gagaatttgcatgtatataaaaatgctcggaaacacaagaaaacatgttcagcatttgtt
gcaatctgcaaagctgaggagaaaaatccaccagaagaaatggacccccctgagagcatc
ctctacccttcaaatgaagttcagtttggagttgcaaacatcctcatctgctttgtgaat
catttctacccacctgggatcaaagtcagctggaccagaaacggccatctggtgtcggag
ggggtgtcactcagtcgatattatcccaataatgatcaaaccttccaccagttcacgacc
ctgacgttcacaccaaaggagggagatatctacagctgtactgttgagcacttagctttg
gacaggcctcaaacaaagatctgggaacctgacttccgtcatcgcagtcttggaccagat
gtttactgtggagttggcctggctctgggcttgttgggagtcgtagctggaacattttta
atggttaagggacaccgtcgacagtaa

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