Anoplopoma fimbria (sablefish): 129111605
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Entry
129111605 CDS
T09102
Symbol
raph1b
Name
(RefSeq) LOW QUALITY PROTEIN: ras-associated and pleckstrin homology domains-containing protein 1b
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afb04990
]
129111605 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
afb04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
129111605 (raph1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
SR-25
SpoIIP
RBD
PH_11
Serinc
Connexin
Motif
Other DBs
NCBI-GeneID:
129111605
NCBI-ProteinID:
XP_054479593
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All DBs
Position
22:complement(11636927..11677142)
Genome browser
AA seq
1600 aa
AA seq
DB search
MDQVSDDELDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDDGRPQKPLQKPPLRQET
NMANFSYRFSMYNINEALNQGDTVDLDALMADLCTIEQELNTISKPNSASRGQNKGQQRG
PGGRSASTKHTGTSGGGSSGGSTSSSTRASPANTVRGGSLNTRPAASNISLDDITSQLEK
ASLSMDEAARQTSSSSSSSSSSFSSTTLRRPSSGSSGGGQHRRTGSVGAVSEQEAASQRS
SVNSACASASSMDSLDIDKVMAGGEAEGQSSQSTQGQNQTSTEHSYLDRETSLILKSIAG
KPSHLLTKEEQAAKLKAEKIRVALEKIKEAQVKKLVIRVHMSDESSKTMMVDERQTVRQV
LDSLLDKSHCGYSPDWSLVETINELQMERIFEDHENLVENLLNWTRDSHNKLMFIERIEK
YALFKNPQNYLLGRKETSEMADRNKEALLEECFCGGSVSVPEIEGILWLKEDGKKSWKKR
YFLLRASGIYYVPKGKAKASRDLVCFLQLDHVNVYYGQDYRSKYKAPTDYCLALKHPQIQ
KKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYVNYQEAMKRTEAAYDWSSLSTSSIRS
GSSSASIPESQSNHSGQSDSGVDTGSSHGRSQSVVSSIFSEAWKRGTQIEESSKHMRMEA
TRGATLPHASHGHRHHSLHSADHPALTPPPQPQVQPQPQPQPPTAPAAASAPAAASAPAD
TPPDTDPGGNTASAPASPASISSTGPATASPVPPAPSAITTVSATASAAADHRRLRPRAP
TAASAASASASASASASASAAAAKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QLAPPPPPPPPPPPPPPPPPPAQTVSHHSPAPTMYKYSTITRLQNQMASQSANHHRLPGH
IHALGQQVLPPSPTPPAALVPVKPNVNHIAARTNVPPPPPPPPPPSMPAPGSAMAMLKLG
PPSPAAPPAFIPPPPAPPAPQTNGVTFPPPPSPPPPPPAPAPMSHPVYPNGLKQVLKERF
PSPPRDLLSPNGVLEESPPPAPAPPPPPPPPPPPPPPPPPQQFPVPAQFPPPPAPPPAPP
KTFTPGFVRHTAPKPVSPVSPFPPRPTPAPFKKQFSLQAGHISSHPPPTLPKQHSMSKPT
PVSMGAAPTMSLVKQLASQFPGASSQVANQAESPKAPLSPPAVKTKPRWQPGGGQQLQSP
EFPPPPPDSNVGFPAAAPPPPPPPPPPPPPAPVTGPPPPPPPPPPAPVTGPPPPPPPPPP
APITGPPPPPPPPPPAPVTGPTPPPPPLPPGNLGSPLRGSATGSSNFEGKKPPPTPQRNT
NAKFNASASYEESRKNLLCKFAPKNNAPSSTPVPPSXSRGSPSKDPSTGPPAPPKPGKLN
LANLPLALQAKVSQVKQTSGDFPSPPPDCAYFPPPPPASELFPPPPPPGSDAHSGGPPRV
AVVNPQPQAPPPPPPVSLVSNSTWGKSSLKKTPPPTLVRRNNTTPEPPPLSPPAPTSPKG
GSGQPNFLDDLHRTLKRKSVGRQGSLNSAGLTGKLDPVGTMDDMALPPPPPELLLDQGNQ
SNGGNGAYMSGNISGYATIRRGPPPAPPKRGDTTKLTGEC
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggtatcagacgatgagctggaccacggagcggaggaggacagcgataaggag
gaccaggacctggacaagatgtttggagcttggcttggagagctggacaagctgacacag
agtctggatgatggcaggcctcagaaaccactgcagaagcctcctctcagacaggagacg
aacatggccaatttctcctaccgcttctcaatgtataacataaacgaggcgttgaaccag
ggcgacacagtggacctggatgccctgatggctgacctgtgcaccattgagcaggagctc
aacaccatttccaaaccaaactctgcgtctcgcggccagaacaaaggccagcagcggggc
cccgggggccgcagtgccagcaccaagcacacaggcaccagtggagggggaagcagcgga
ggaagcaccagtagcagtacccgggcgtcgccggccaacacagtgcgaggcggcagcctc
aacacccgccccgctgcctccaacatctccctggatgacatcacctctcagctggagaag
gcctctctcagcatggacgaggcggcacgtcagacctcctcctcctcttcctcctcctct
tcctctttctcctccaccacgctccggcggccctcatcggggtcgtccggcggcgggcag
cacaggaggacgggctcagtgggcgcggtcagcgagcaggaggctgcgtcccagcggtcc
agcgtgaattcagcgtgtgcctcggcgtccagcatggactccctggacatcgacaaagtg
atggcgggtggagaggcggagggtcagagcagccagagcacacaaggacagaaccagacc
agcacagagcactcctatctggaccgagaaacctcgctcattctgaaaagcatagcagga
aagccttctcacctcctgaccaaggaggaacaagctgccaaactgaaggcggagaagatc
cgagttgccctggaaaaaatcaaggaggcacaggtcaaaaagctggtgatccgggtccac
atgtcagacgagagctccaagaccatgatggtggatgagcggcagacggtcaggcaggtg
ctggacagcctgctggataagtcgcactgtggctacagccccgactggtccctcgtggaa
accatcaacgagctacagatggaacgtattttcgaggatcatgagaacctggtggagaat
ctattaaactggacccgggacagccacaacaagctcatgttcatcgaacgcatcgagaaa
tacgctctcttcaagaaccctcagaactacttgctggggcggaaggagacgtctgaaatg
gctgacaggaacaaagaggctctgttagaggagtgtttctgcggcggctcggtgtcggtg
ccagagatcgagggcatcctgtggctgaaggaggacgggaagaagtcgtggaagaaacgt
tacttcctcctcagagcttcggggatctactacgtccccaaaggcaaagccaaggcatcc
agagatctcgtgtgcttcctgcagctggaccacgtgaacgtgtactacggccaggactat
cgcagtaaatacaaggctcccactgactactgcctggccctgaagcatccccaaatccaa
aagaagtcccagtacatcaagtatctgtgctgtgatgacgtcaggaccctgcaccaatgg
gtgaacggaattcgcatcgccaagtatggcaagcaactctatgtgaactaccaggaggcc
atgaagaggacagaggcggcctacgattggtcctctctctctacgtccagcatccgatca
ggctccagctctgccagcattcctgagtcccagtctaatcactcgggccagtcagacagt
ggagtggacactggctcttctcatggccggtcccagagtgtcgtgagctccattttttct
gaggcctggaagagaggcacccagatcgaggaaagctccaagcacatgagaatggaggcg
accagaggggccaccctgccgcacgcttcccacggtcaccggcatcacagcctgcattca
gccgaccatccggccctgacgccacctccacaaccgcaggtgcagcctcagcctcagcct
cagcccccaacagcacccgccgcagcatcagcacccgccgcagcatcagcacccgccgac
acacccccagacaccgacccagggggcaacacagcatcagcacccgcctccccagcatcc
atctcctcaacaggccccgcaaccgcctccccagttcccccagcgccctcagcaatcacc
acagtctccgcaaccgcatcagcagccgcagaccatcggcggctacggccacgcgccccc
actgcagcatcagcagcatcagcatcagcatcagcatcagcatcagcatcagcatcagca
gcagcagcaaagcagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcag
cagcagcagcagcagcaacaacagcagcagcaacagcagcagcaacaacagcagcagcaa
cagctggctcctccgcccccgcctccccctccgccgcctccccctcctcctcccccgccc
ccggctcaaacggtctcgcaccactcgccggctcccaccatgtacaagtacagcaccatc
accaggctgcagaaccagatggcctcccagtccgccaatcaccacaggttgcccggccac
atccatgcattagggcagcaggttctgcccccatctccgacaccacctgccgcactggtg
cccgtcaaacccaacgtcaatcacattgcagcaaggaccaatgtgccgcctcctcctcct
cctccccctccgccgtccatgccggcccctgggtccgccatggcgatgttgaagctgggc
cctcccagcccggctgccccgcctgccttcattcccccacccccagcacctcctgctcca
cagacgaatggagtaactttccctccccctccttctcctccaccaccccctcctgcaccg
gctcccatgagccaccctgtttaccccaacgggctgaagcaggtgctgaaggaaaggttt
cccagcccgccgcgagacctcctctctccaaatggagtcctcgaggagtccccgccgcct
gccccagctccaccacctccacctcctccgcccccacctccgccgccgcctcctcctccc
cagcagttcccagtgccagcccagttcccgcctccccctgcgccgccgccagcgccaccc
aaaaccttcacaccggggtttgtccgtcacactgcccccaaacctgtgtcacctgtctct
ccatttcccccccgccccacacccgcacccttcaagaagcagttcagcctccaggcagga
cacatctccagccatccccctccgactctcccaaagcagcacagcatgtctaaaccaaca
ccggtctccatgggagccgctcctaccatgtctttggtgaaacagctagcaagtcagttt
ccaggagcttcgtcccaagtagccaatcaggcggagagccccaaagcccccctctcccca
cctgcagtcaagaccaaaccaaggtggcagcctgggggtggccagcagcttcaatctcca
gagttccctcctcctcctccagacagcaacgtcggcttccctgccgccgcccctcctcct
ccgcctccacctcctccgccacctcctccagcccctgttacaggcccacctccacctcct
ccgccacctcccccagcccctgttacaggcccacctccacctcctccgccacctccccca
gcccctattacaggcccacctccacctcctccgccacctcccccagcccctgttacaggc
ccaactccacctcctcctcccctccctcctggaaacctgggctctcccttgcgggggtca
gctactggctcctccaatttcgaaggcaagaagccccctcccaccccgcagaggaacacc
aacgccaagttcaacgcatccgcttcctatgaggaatccaggaagaacttgctctgcaag
tttgctcccaagaataacgccccctcttccaccccggtcccgccttctngctcccgtgga
tccccttccaaggacccttcaactggaccccctgctcccccgaaaccaggcaagctcaac
ctggccaacctgccattggcactccaggctaaagtgagccaggtaaagcaaaccagtggg
gacttcccttccccgccacctgactgcgcctacttcccacctcctcccccagcctccgag
ctcttcccccctcctccccctcccggtagtgatgcccatagcggaggacctcctagggtc
gccgtggtcaacccccagccccaggctccccctcctcctccgcctgtctcccttgtcagc
aactctacgtgggggaagagctccctgaaaaagactcctccgcccacgcttgtgcggcgt
aacaacaccaccccggagccccctccactctcaccacctgcacccacctccccaaagggc
ggctcgggccagcccaatttcctggatgatctccaccggacactgaagcgaaagtcagtg
ggtcgccaaggttccctcaactcggccggcctcacgggcaaactggaccctgtgggaact
atggacgacatggcgctgcctccgccgccccctgagctgctcctggaccaaggaaatcag
agcaatggaggaaacggtgcctacatgtctggaaacatctcaggctatgcaacaatacga
agaggacccccacctgcaccacccaaacgaggggacacaaccaaacttactggcgagtgt
tga
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integrated database retrieval system
