KEGG   Anoplopoma fimbria (sablefish): 129111733
Entry
129111733         CDS       T09102                                 
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase
  KO
K00106  xanthine dehydrogenase/oxidase [EC:1.17.1.4 1.17.3.2]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb00230  Purine metabolism
afb00232  Caffeine metabolism
afb00983  Drug metabolism - other enzymes
afb01100  Metabolic pathways
afb01232  Nucleotide metabolism
afb04146  Peroxisome
Module
afb_M00546  Purine degradation, xanthine => urea
afb_M00958  Adenine ribonucleotide degradation, AMP => Urate
afb_M00959  Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:afb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    129111733 (xdh)
  09110 Biosynthesis of other secondary metabolites
   00232 Caffeine metabolism
    129111733 (xdh)
  09111 Xenobiotics biodegradation and metabolism
   00983 Drug metabolism - other enzymes
    129111733 (xdh)
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    129111733 (xdh)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129111733 (xdh)
Enzymes [BR:afb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.4  xanthine dehydrogenase
     129111733 (xdh)
   1.17.3  With oxygen as acceptor
    1.17.3.2  xanthine oxidase
     129111733 (xdh)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   129111733 (xdh)
SSDB
Motif
Pfam: MoCoBD_2 MoCoBD_1 FAD_binding_5 Ald_Xan_dh_C CO_deh_flav_C Fer2_2 Fer2
Other DBs
NCBI-GeneID: 129111733
NCBI-ProteinID: XP_054479783
LinkDB
Position
22:complement(380963..402079)
AA seq 1344 aa
MDTSGAQSPRPDELLFFVNGQKIVERNADPETTLLTYLRRKLGLTGTKLGCAEGGCGACT
VMLSRYQTHTEQLLHYAVNACLAPLCSLHLVAVTTVEGIGSVAKKLHPVQERIARAHGSQ
CGFCTPGIVMSMYALLRNNPTPKMADVEEAFQGNLCRCTGYRPILEGYKTFTVEGGCCGG
RGRDNGCCMANGSGAERSSEEVVDEATSLFNAADFAPFDPTQEVIFPPELMSLTKGQRSA
SLCFHGDRATWLQPNSLDEFLRLKWKHPDARVVVGNTEVGIEVKFKSMVYPVILAPAFMP
ELNAVRRSEDGVVFGAACTLSHMGAVLRQEVETLPPHQTQVFLAVLEQLRWFAGLQIRNV
AAVGGNIMTASPISDLNPVFMATGCKLTLMDKDGSRVVRMDDTFFTGYRRTVVRPQEILV
SIEIPYSQKTQFVSAFKQSPRREDDISTVTAAMSVTFTPGTDVVEDLRLSYGGMAATTTM
ATRTAETLLGRRWGEELLQDACSSLAQEMTLDPSAPGGMVTYRRTLSLSLFYKFYLTVLQ
KLRDQGVKADEVRADCLSAADVYHAETPSSVQVYQAVPEGRVQDDVVGRPMMHLSALKQA
TGEAVYCDDVPLYENELYLSLVTSTRAHANILSIDTSAAEQLPGVVCCVFAADIPGSNAT
GAVQYDETVLADRQVTCVGHIIGAVVADTQLHAQRAAKAVRIQYEELQPLVTIQEAIAAQ
SFYQPIRTLQSGDLEAGFKQADHVLEGEMHMGGQEHFYLETNVSLAVPRGEDGEIELFVS
TQSAAKTQSLVAKALGVPANRVVVRVKRMGGGFGGKETRTTVLSTVVAVAANKLKRPVRC
MLDRDEDMLVTGGRHPFYGKYKVGFLNSGKVVALDVSYYSNAGNSMDLSLSIMERALFHM
ENSYSVANVRGRGFMCRTNLPSNTAFRGFGGPQGMMIAESWITDVAQSLGRPAEEVRRLN
LYVEGESTPYTQILTQFTLDRCWDECLSRSGYQQRRAAVNIYNSQNRWTKRGLAIVPTKF
GISFTALFLNQAGALVHIYTDGSVLLTHGGTEMGQGLHTKMIQVASRVLGIPCSKIHISE
TSTNTVPNTSPTAASASSDLNGAAVQNACEILVKRLEPYKTKSPKGSWEDWVRAAYFDRV
NLSANGFYKTPDLGYDFVSNSGRAFNYFTYGVACSEVEVDCLTGAHKNLSTTIVMDVGHS
LNPAIDIGQVEGGFMQGLGLFTLEELHYSPQGVLLTRGPGSYKIPAFGDIPTQLTVSLLR
DAPNDKAIFASKAVGEPPLFLASANFYAIKDAIAAARLESGISGPFRLDSPASSERIRNA
CSDRFTKLCPPAEPSSFVPWSVQV
NT seq 4035 nt   +upstreamnt  +downstreamnt
atggacaccagcggggcccagagcccgaggccggacgagctgctgttcttcgttaacgga
cagaagattgttgagagaaacgcagatcctgagacgactctgctgacgtacctgaggagg
aaactgggtttaacaggaaccaaactaggatgtgctgaaggaggatgtggagcctgtacc
gtcatgctgtccagataccagacccacactgaacagctgcttcactacgccgtcaacgcc
tgtctcgccccgctctgctccctacacctggttgccgtgacgaccgtggagggcatcggc
agtgtcgcgaaaaaattacatcctgtacaggagcgaatagccagagctcacggctctcag
tgtggattctgtactccggggatcgtcatgtccatgtacgctctgctgaggaacaacccc
acgcccaaaatggccgacgtggaggaggccttccaaggaaatctgtgtcggtgcaccgga
tacagacccatactggagggatacaagaccttcactgtggagggggggtgctgtggtggc
agggggcgggacaacggctgctgtatggccaatgggagtggagctgagagaagttcagag
gaagtcgttgatgaagcaacatctttatttaacgcagcagacttcgcgccctttgacccc
acacaggaagtcatcttccctcctgaactcatgtctctcaccaaaggtcaaaggtcagcc
tcgctgtgtttccatggcgaccgggcgacgtggctgcagccaaacagtctggacgagttt
ctgcgtctgaaatggaaacaccccgacgcccgggtggtggtgggaaacaccgaagtgggt
atcgaggtgaagtttaagagcatggtgtacccggtcatcctggctccggccttcatgcct
gagctgaacgcagtgagacgctctgaggacggcgttgtgttcggtgcagcgtgcacgctc
agccacatgggggcggtgctgaggcaggaagtggagactcttcctcctcaccagacccaa
gtcttcctcgccgttctagaacagctgcgctggttcgctggactgcagatccgcaacgtc
gctgccgtcggaggaaacatcatgacagccagccccatctcagacctgaacccagtgttc
atggcaacgggctgcaaactcaccctgatggacaaagacggcagccgtgtggttcggatg
gacgacacgttcttcaccggctacagaaggacggtggttcgaccccaggagatcctggtg
tccatagagatcccgtacagccagaagactcagttcgtctccgccttcaagcagtcgcct
cgccgcgaggacgacatcagcaccgtcaccgcggcgatgagcgtcaccttcactcccggg
accgacgtggtggaggacctgaggctgagctacggcggcatggcggccaccaccacgatg
gccaccaggacggcggagacgctgctggggaggcggtggggggaggagcttctgcaggac
gcctgctcctcattggcccaggagatgaccctcgacccctctgcgccgggcggcatggtg
acgtaccggcggactctgtccctgagcctcttctacaagttctacctgacggttctgcag
aagctcagagaccagggggtgaaagcggacgaggtccgggccgactgtctgagcgccgca
gacgtgtaccatgcagagaccccgtccagcgttcaggtctaccaggcggtgccggagggg
cgggtccaggacgacgtggtgggccgtcccatgatgcacctgtcggccctgaagcaggcg
acgggcgaggcggtttactgcgacgacgtgccgctgtacgagaacgagctctacctgtca
ctggtcaccagcaccagagcccacgccaacatcctctccatagatacctcagcagcagag
cagttacctggcgtggtctgctgtgtgtttgccgccgacatccccggcagcaacgccacc
ggagcggtccagtacgacgagaccgtcctcgccgaccgacaggtgacgtgtgtcggtcac
atcatcggcgccgtggtggccgacacccagcttcacgctcagagagccgccaaagccgtc
cggatccagtacgaagagctgcagccgctggtcaccatccaggaggccatagctgcccag
tccttctatcagccaatcagaaccctccagagtggggacctagaggcggggtttaaacag
gccgaccacgtcctggagggtgagatgcacatgggaggtcaggaacatttctacctggag
acaaacgtctctctggctgttcctcgaggagaagatggagagatagagctctttgtttct
actcagtctgctgccaaaacacagtctctggtggccaaggcgctgggcgtccctgcaaac
agggtggtggtccgggtgaagaggatgggtggaggcttcggggggaaggagactcgaacc
accgtgttgtccactgtggtcgccgtggcagcaaacaagctgaagaggcctgtgaggtgc
atgttggacagagacgaggacatgttggtgacgggaggacgacaccccttctacgggaaa
tacaaggtgggtttcctaaacagtgggaaggtcgttgctttggacgtgtcgtactacagc
aacgctggaaactccatggacctgtctctgtcgatcatggagcgcgctctgttccacatg
gagaactcgtacagcgtggccaacgtgcgcggccgcggcttcatgtgccgcaccaacctg
ccgtccaacacggccttcaggggctttggagggccgcaaggcatgatgatcgctgagagc
tggataaccgacgtggctcagagtctgggcaggccggccgaggaagtgcgccggttgaac
ctgtacgtggaaggagagtccacgccctacacccagatcctgactcagttcaccctggac
cgctgctgggacgagtgtctgtcccgctctggataccagcagcgtcgagccgccgtcaac
atttacaacagtcagaaccggtggaccaaacgaggcctcgccatcgtccccaccaagttc
ggcatcagcttcaccgccctcttcctcaaccaggctggagctctggttcatatctacacc
gacggctcggtgttgttgacccacggagggacggaaatgggacaaggcctccacaccaag
atgatccaggttgccagccgggttctgggtatcccctgttcaaagatccacatctcagag
accagcaccaacacagtccccaacaccagccccaccgccgcctccgcctcctcggacctc
aacggggccgctgtgcagaacgcctgtgagatcctcgtgaaacgcctggagccgtataag
accaagagccccaaaggatcatgggaagactgggtgcgagcagcgtatttcgacagagtc
aacctcagtgcaaacggtttttacaagactccagatcttggttacgactttgtctcaaac
tcgggccgagcgttcaactacttcacctacggagtggcctgttcagaggtggaggtcgac
tgtctgaccggagctcacaagaacctgagtaccaccatagtgatggacgtcggtcacagc
ctcaacccggctatagacatcggacaggtggagggggggttcatgcagggtctgggtctc
ttcaccctggaggagctccattattcgccccagggcgtcctcctcactcggggtcctggt
tcttataagatcccggcttttggtgacatccccacccagctgaccgtctcgctgctccgg
gacgccccgaacgacaaggccatcttcgcctccaaggctgtcggagagccgcctctcttt
ctggcctcggcgaatttctacgccatcaaagatgccatcgctgccgcccggctggagtcg
ggcatcagcggtccgttcaggctggacagccccgcctcctccgagaggatccgcaacgcc
tgcagcgacagattcaccaaactgtgtcctccagcagaacccagttccttcgtcccctgg
tccgtccaagtctag

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