Anoplopoma fimbria (sablefish): 129111733
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Entry
129111733 CDS
T09102
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00230
Purine metabolism
afb00232
Caffeine metabolism
afb00983
Drug metabolism - other enzymes
afb01100
Metabolic pathways
afb01232
Nucleotide metabolism
afb04146
Peroxisome
Module
afb_M00546
Purine degradation, xanthine => urea
afb_M00958
Adenine ribonucleotide degradation, AMP => Urate
afb_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
129111733 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
129111733 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
129111733 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
129111733 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129111733 (xdh)
Enzymes [BR:
afb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
129111733 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
129111733 (xdh)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of breast milk
129111733 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
CO_deh_flav_C
Fer2_2
Fer2
Motif
Other DBs
NCBI-GeneID:
129111733
NCBI-ProteinID:
XP_054479783
LinkDB
All DBs
Position
22:complement(380963..402079)
Genome browser
AA seq
1344 aa
AA seq
DB search
MDTSGAQSPRPDELLFFVNGQKIVERNADPETTLLTYLRRKLGLTGTKLGCAEGGCGACT
VMLSRYQTHTEQLLHYAVNACLAPLCSLHLVAVTTVEGIGSVAKKLHPVQERIARAHGSQ
CGFCTPGIVMSMYALLRNNPTPKMADVEEAFQGNLCRCTGYRPILEGYKTFTVEGGCCGG
RGRDNGCCMANGSGAERSSEEVVDEATSLFNAADFAPFDPTQEVIFPPELMSLTKGQRSA
SLCFHGDRATWLQPNSLDEFLRLKWKHPDARVVVGNTEVGIEVKFKSMVYPVILAPAFMP
ELNAVRRSEDGVVFGAACTLSHMGAVLRQEVETLPPHQTQVFLAVLEQLRWFAGLQIRNV
AAVGGNIMTASPISDLNPVFMATGCKLTLMDKDGSRVVRMDDTFFTGYRRTVVRPQEILV
SIEIPYSQKTQFVSAFKQSPRREDDISTVTAAMSVTFTPGTDVVEDLRLSYGGMAATTTM
ATRTAETLLGRRWGEELLQDACSSLAQEMTLDPSAPGGMVTYRRTLSLSLFYKFYLTVLQ
KLRDQGVKADEVRADCLSAADVYHAETPSSVQVYQAVPEGRVQDDVVGRPMMHLSALKQA
TGEAVYCDDVPLYENELYLSLVTSTRAHANILSIDTSAAEQLPGVVCCVFAADIPGSNAT
GAVQYDETVLADRQVTCVGHIIGAVVADTQLHAQRAAKAVRIQYEELQPLVTIQEAIAAQ
SFYQPIRTLQSGDLEAGFKQADHVLEGEMHMGGQEHFYLETNVSLAVPRGEDGEIELFVS
TQSAAKTQSLVAKALGVPANRVVVRVKRMGGGFGGKETRTTVLSTVVAVAANKLKRPVRC
MLDRDEDMLVTGGRHPFYGKYKVGFLNSGKVVALDVSYYSNAGNSMDLSLSIMERALFHM
ENSYSVANVRGRGFMCRTNLPSNTAFRGFGGPQGMMIAESWITDVAQSLGRPAEEVRRLN
LYVEGESTPYTQILTQFTLDRCWDECLSRSGYQQRRAAVNIYNSQNRWTKRGLAIVPTKF
GISFTALFLNQAGALVHIYTDGSVLLTHGGTEMGQGLHTKMIQVASRVLGIPCSKIHISE
TSTNTVPNTSPTAASASSDLNGAAVQNACEILVKRLEPYKTKSPKGSWEDWVRAAYFDRV
NLSANGFYKTPDLGYDFVSNSGRAFNYFTYGVACSEVEVDCLTGAHKNLSTTIVMDVGHS
LNPAIDIGQVEGGFMQGLGLFTLEELHYSPQGVLLTRGPGSYKIPAFGDIPTQLTVSLLR
DAPNDKAIFASKAVGEPPLFLASANFYAIKDAIAAARLESGISGPFRLDSPASSERIRNA
CSDRFTKLCPPAEPSSFVPWSVQV
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagcggggcccagagcccgaggccggacgagctgctgttcttcgttaacgga
cagaagattgttgagagaaacgcagatcctgagacgactctgctgacgtacctgaggagg
aaactgggtttaacaggaaccaaactaggatgtgctgaaggaggatgtggagcctgtacc
gtcatgctgtccagataccagacccacactgaacagctgcttcactacgccgtcaacgcc
tgtctcgccccgctctgctccctacacctggttgccgtgacgaccgtggagggcatcggc
agtgtcgcgaaaaaattacatcctgtacaggagcgaatagccagagctcacggctctcag
tgtggattctgtactccggggatcgtcatgtccatgtacgctctgctgaggaacaacccc
acgcccaaaatggccgacgtggaggaggccttccaaggaaatctgtgtcggtgcaccgga
tacagacccatactggagggatacaagaccttcactgtggagggggggtgctgtggtggc
agggggcgggacaacggctgctgtatggccaatgggagtggagctgagagaagttcagag
gaagtcgttgatgaagcaacatctttatttaacgcagcagacttcgcgccctttgacccc
acacaggaagtcatcttccctcctgaactcatgtctctcaccaaaggtcaaaggtcagcc
tcgctgtgtttccatggcgaccgggcgacgtggctgcagccaaacagtctggacgagttt
ctgcgtctgaaatggaaacaccccgacgcccgggtggtggtgggaaacaccgaagtgggt
atcgaggtgaagtttaagagcatggtgtacccggtcatcctggctccggccttcatgcct
gagctgaacgcagtgagacgctctgaggacggcgttgtgttcggtgcagcgtgcacgctc
agccacatgggggcggtgctgaggcaggaagtggagactcttcctcctcaccagacccaa
gtcttcctcgccgttctagaacagctgcgctggttcgctggactgcagatccgcaacgtc
gctgccgtcggaggaaacatcatgacagccagccccatctcagacctgaacccagtgttc
atggcaacgggctgcaaactcaccctgatggacaaagacggcagccgtgtggttcggatg
gacgacacgttcttcaccggctacagaaggacggtggttcgaccccaggagatcctggtg
tccatagagatcccgtacagccagaagactcagttcgtctccgccttcaagcagtcgcct
cgccgcgaggacgacatcagcaccgtcaccgcggcgatgagcgtcaccttcactcccggg
accgacgtggtggaggacctgaggctgagctacggcggcatggcggccaccaccacgatg
gccaccaggacggcggagacgctgctggggaggcggtggggggaggagcttctgcaggac
gcctgctcctcattggcccaggagatgaccctcgacccctctgcgccgggcggcatggtg
acgtaccggcggactctgtccctgagcctcttctacaagttctacctgacggttctgcag
aagctcagagaccagggggtgaaagcggacgaggtccgggccgactgtctgagcgccgca
gacgtgtaccatgcagagaccccgtccagcgttcaggtctaccaggcggtgccggagggg
cgggtccaggacgacgtggtgggccgtcccatgatgcacctgtcggccctgaagcaggcg
acgggcgaggcggtttactgcgacgacgtgccgctgtacgagaacgagctctacctgtca
ctggtcaccagcaccagagcccacgccaacatcctctccatagatacctcagcagcagag
cagttacctggcgtggtctgctgtgtgtttgccgccgacatccccggcagcaacgccacc
ggagcggtccagtacgacgagaccgtcctcgccgaccgacaggtgacgtgtgtcggtcac
atcatcggcgccgtggtggccgacacccagcttcacgctcagagagccgccaaagccgtc
cggatccagtacgaagagctgcagccgctggtcaccatccaggaggccatagctgcccag
tccttctatcagccaatcagaaccctccagagtggggacctagaggcggggtttaaacag
gccgaccacgtcctggagggtgagatgcacatgggaggtcaggaacatttctacctggag
acaaacgtctctctggctgttcctcgaggagaagatggagagatagagctctttgtttct
actcagtctgctgccaaaacacagtctctggtggccaaggcgctgggcgtccctgcaaac
agggtggtggtccgggtgaagaggatgggtggaggcttcggggggaaggagactcgaacc
accgtgttgtccactgtggtcgccgtggcagcaaacaagctgaagaggcctgtgaggtgc
atgttggacagagacgaggacatgttggtgacgggaggacgacaccccttctacgggaaa
tacaaggtgggtttcctaaacagtgggaaggtcgttgctttggacgtgtcgtactacagc
aacgctggaaactccatggacctgtctctgtcgatcatggagcgcgctctgttccacatg
gagaactcgtacagcgtggccaacgtgcgcggccgcggcttcatgtgccgcaccaacctg
ccgtccaacacggccttcaggggctttggagggccgcaaggcatgatgatcgctgagagc
tggataaccgacgtggctcagagtctgggcaggccggccgaggaagtgcgccggttgaac
ctgtacgtggaaggagagtccacgccctacacccagatcctgactcagttcaccctggac
cgctgctgggacgagtgtctgtcccgctctggataccagcagcgtcgagccgccgtcaac
atttacaacagtcagaaccggtggaccaaacgaggcctcgccatcgtccccaccaagttc
ggcatcagcttcaccgccctcttcctcaaccaggctggagctctggttcatatctacacc
gacggctcggtgttgttgacccacggagggacggaaatgggacaaggcctccacaccaag
atgatccaggttgccagccgggttctgggtatcccctgttcaaagatccacatctcagag
accagcaccaacacagtccccaacaccagccccaccgccgcctccgcctcctcggacctc
aacggggccgctgtgcagaacgcctgtgagatcctcgtgaaacgcctggagccgtataag
accaagagccccaaaggatcatgggaagactgggtgcgagcagcgtatttcgacagagtc
aacctcagtgcaaacggtttttacaagactccagatcttggttacgactttgtctcaaac
tcgggccgagcgttcaactacttcacctacggagtggcctgttcagaggtggaggtcgac
tgtctgaccggagctcacaagaacctgagtaccaccatagtgatggacgtcggtcacagc
ctcaacccggctatagacatcggacaggtggagggggggttcatgcagggtctgggtctc
ttcaccctggaggagctccattattcgccccagggcgtcctcctcactcggggtcctggt
tcttataagatcccggcttttggtgacatccccacccagctgaccgtctcgctgctccgg
gacgccccgaacgacaaggccatcttcgcctccaaggctgtcggagagccgcctctcttt
ctggcctcggcgaatttctacgccatcaaagatgccatcgctgccgcccggctggagtcg
ggcatcagcggtccgttcaggctggacagccccgcctcctccgagaggatccgcaacgcc
tgcagcgacagattcaccaaactgtgtcctccagcagaacccagttccttcgtcccctgg
tccgtccaagtctag
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