Anoplopoma fimbria (sablefish): 129111946
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Entry
129111946 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: desmoplakin-A-like
KO
K10381
desmoplakin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04382
Cornified envelope formation
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129111946
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129111946
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129111946
04147 Exosome [BR:
afb04147
]
129111946
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
129111946
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129111946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plectin
Spectrin_2
Spectrin_3
SH3_10
SR_plectin_7
Spectrin
Ntox10
Motif
Other DBs
NCBI-GeneID:
129111946
NCBI-ProteinID:
XP_054480088
LinkDB
All DBs
Position
3:complement(15809787..15827592)
Genome browser
AA seq
2244 aa
AA seq
DB search
MSMYGSSSKLATMGQRSNSRQDLANASFRNDVFVGGNGFHGDYQAGDGLTSFTTYSRTSM
HGGGGQKVSTSMGGGGGMNAQAIHQKSLFLTSQCQEYLQRAKLILHGGGPAVEADKLLSM
AAESMDQLTVFGRELQQMRIPNDLSRNVEQFQHMHAGLQQQLVGGMTIRRNRGSVGSLEG
GRIYNDAMGWIAQQKRMIETAPWGDDAETIEKQIQSHNKNHSSIQRSQEVDRARDELNVR
GDKYNLSMLEQEWESLQKMSHSRVQQLRELQGIINEISRAIMWVNEREEEELMFDWGDKN
IDQYIPRKQESYSDLMRDLEEKEKELNKLKVKADGLLNNNHPASDKIDAYMDTLQTQWSW
LLQITKCIDTHLKDNAAYSQFFKEANETHAKLQKEYDSIRNKFTCDKNTPLDNLNELLRN
LEREKERVMENKRQVQSLVNKSKSIVRLKPRNPEEKTTSPVMVQAICDFKQDQKGILKGN
EGILKDNSQRSKWLVTGPGGLDMLIPSVCLKIPPPNPLSIGLANKNEQYYDAIMSSWNQL
FINIKSLISWQYCLRDMNYISSLTVSMLSKMRPDEYRSIIKRLETHYQEFLRTSQGSEMF
GEEDKKTIQGHFDKAQTHYDTLIIQLPTDGGEKTEPPKPEPSKPSSKIPKTNVPTSSTLS
LTLLSSLQNLRCRLELAESGLTSHLHVPLGDNGVHECSVHIQKLQTVHQDLDSIHDEYLL
LREKILKQLEGIPADSEQAKFLRSELEIINQKLGGLQGLYPAYVERLSALKALLQSLLQA
EDIVKVHEARLTEKETTSMDLREVENYRSTLKQMKSDLEQKRDLLTAMESDLAKAVHWNG
QISESFHKCDVDLSKYSDLVGQMSDRWRRIQTQIERRGWDLEKQEKQLNHYQQSSTLLQQ
WINDARKRQDTLQAVKLSDIQTLMDHLNQQKALHTEIKGKQEKVEVVQKNADTCAGSIKD
YELQLASYSSGLETLLNIPVNRTMLQSPASVVRQEAADLQSQYIELLTRSSDYYRFLGEL
LKNMEELKIRNTRIELMDEELKRLKDDIQDRNQKNKSLEDTLDRYKLELSQSQEQLCSME
EVKRFTAIKVNATKESLDSTHSQLQDLNEELIRIKYQLDEEKRKRRLAEERYTSQQEEYE
GTVRRRQKELEELNWSKIDLEKSVKDKERELERMKTQLDEEGARRRNAESDISKISMRMH
DSQSQYSDLLLERDNLITKLKLLEQDKTRQLRIEDELTRIKLTLETELRNKQRLQDEKST
VLKDFNYMKSQYELRECHIKKFESDRDQADRERLNLKNEIEKLMRELKTVEERYKSRLMI
SEKEASDLALKRIALEKEIQRLQKIDPSKLIFEGVRHKVTAHQLCDCGIISKATLDQLLK
GKKSVDEVAVDIQLSLKGTGIIAGMTTCNQGKMPFTEAKTKNLLSKESAIMLLEAQAATG
YIVDPAFNERMPVDTACSRGIVDTEDRDTLVTAEAASTGFKDPYSGKVLSVGQACKQGRV
NKDTAIRLLQAQESVGGILDPVLSVFLPRDLALDRNLIDEDLYRALGKNPPXYLEPSTGE
KITYNDLRKKCTVEPVSGLLLLRGPEKAMTVKGLRGEVPVDELIKSDLLDETDLAKLKQG
KLSSREIEDKLKSYLYGSTCIAGIYDEANERIMPFYQAMREGLLMRGTTLELLEAQAASG
FIVDPVNNVFLTVEEASKRSLIGNEFKNKLLSAEKAVTGYKDPSTGKTISLFQAIEKDLI
EKGHGIRLLEAQIASGGIIDPKASHRIDVAVAYTRGYFDEEMNEILSYEGDDTKGFFDPN
TKENLTYLQLKDRCMTDPKTGLILLPLRDKNKPKKSQESRSNVLRKRRVVIVDPDTGLEM
SVREAYHRELIDYDTFLDLSEQECEWEEITIKGSDGSARLVIVDRKTGTQYDIQDCLKRS
VIEQKSLDQYRAGTLTLTQFADQITSRTSSIEMTIAASNVDDMVTCSSPTQLAPSSPTVR
KRFNSISITVSPPEMFDDHSPVAAIFDTETLEKITLSEALRRGLVDTITTQRLLEAQTCT
GGIINPATGERLSLQDAVHQSVIDDSMASKLKPAQKAYVGFEDVKTKRKMSVAEAVKETW
LPYEAGQRFLEFQYLTGGLIEPGSGRRVTIEEAIRTGWLDGQGAQKLQDTRNHKKNLTCP
KTKLKISYKEAMDSCMVEESNGMKMLQASSMSTKGISSPYNVSNPGSRSGSRAGSLASSR
NGSRRGSVDYSSTFSYSFSSNSAI
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtacggctccagctcaaagctggccaccatgggccagagaagtaactcgcga
caggacttggcgaatgcgagttttcgaaacgacgtgttcgtcggtggaaacggcttccat
ggagactaccaagcgggggacggcttgacctccttcaccacctactccaggacctccatg
cacggcggagggggacagaaggtgtccaccagcatgggtggaggcggtggaatgaatgca
caggcaatccatcaaaaatcgttgttcctgacaagccagtgccaggaatacctgcagaga
gcaaagttgatcctccatggtgggggtccagctgtggaggcagacaaactgttgagcatg
gctgcagagagcatggatcagctgacagtctttggcagagagctgcagcaaatgcgtatt
cccaatgacctctccagaaacgtagagcagttccagcacatgcatgctgggctccaacag
caattagtcggtggtatgaccatcagacgaaaccgaggcagcgtgggctccctcgaaggg
gggaggatctataatgatgccatgggctggatcgctcaacagaagcgcatgattgagacg
gctccatggggagatgacgccgaaacaatagaaaagcaaatccaaagccacaacaaaaac
cacagctccatccagaggagccaggaagtagaccgtgccagagatgaactgaacgtgagg
ggcgacaagtacaacctgtccatgctggaacaagaatgggagagcctgcagaaaatgtcc
cacagccgcgtgcaacagctgcgtgagctccagggcatcatcaatgagatctcccgagcc
atcatgtgggtgaacgagagagaggaggaagagctcatgtttgactggggtgacaagaac
atcgaccagtacatccccaggaagcaggagagctactcggacctgatgcgggacctggag
gagaaagagaaggagctaaacaagctgaaggtgaaagcagatggactcctgaacaacaac
caccccgcctctgataagattgatgcctacatggacaccttacagacccagtggagctgg
cttctccagatcaccaagtgcatcgacactcacctgaaggacaacgcggcctacagccaa
tttttcaaggaggccaacgagacccacgccaagctgcagaaagagtacgactccatcaga
aacaagttcacgtgtgacaagaacaccccgctggataacctcaatgaactcctgagaaac
ctggagagagagaaggagcgcgtaatggagaataagaggcaggtccaaagtctggtcaac
aaatcaaagtccattgtccggctgaaacctcgcaaccctgaggagaaaaccaccagcccc
gtcatggtccaggccatatgtgacttcaaacaagaccagaaggggattttaaaagggaac
gaaggcatcctgaaggataactcgcagcgcagcaagtggctggtgacgggacccggaggt
ctggacatgttgatcccctctgtgtgtctgaagatccccccacccaacccgctcagcatc
ggccttgccaacaagaatgagcagtattatgacgccatcatgagcagctggaatcagctc
ttcatcaacatcaagagcctcatctcgtggcaatactgcctcagagacatgaactacatc
agctccctcactgtcagcatgctgtctaagatgcgtcctgatgagtaccgcagtatcatc
aaaagactggagactcactaccaagagttcctgcgtaccagccaaggttctgagatgttt
ggggaagaggacaagaaaactatccagggccactttgataaagcccagacccactatgat
accctgattatccagctgcctacagatggaggggagaagactgaacccccaaaaccggaa
cccagcaagccgtcttccaagatcccaaagaccaatgtcccaaccagctccaccctcagc
ctcaccctgctcagcagcctgcaaaatcttcgatgcaggctggagctggcggagtccggt
ctgaccagtcatctccacgttcccctcggggacaacggtgtgcacgagtgctcagtgcac
atccagaagctgcagactgtgcaccaagacttggactccattcacgatgagtacctgcta
ctaagagaaaagatcctaaagcagctggaggggatacctgccgactccgagcaagccaag
ttcctccgctctgaactggaaatcatcaaccagaaactgggaggcctgcagggtctctac
ccagcctacgtagaaaggctgtcagctcttaaggccttgctccagagccttctccaggct
gaggatattgttaaagtccatgaggcccggctgacagagaaggagaccacctctatggac
cttcgggaggtggaaaactatcggagcacgctcaagcaaatgaagagcgatctggagcaa
aaaagagacctgctgacagctatggagtctgacctggctaaagctgtgcactggaatggt
caaatctcagagtccttccacaagtgtgacgtggacttgtccaagtactcggacctggtg
ggtcagatgtctgaccgctggcgccgcatccaaacccagattgaacgcagagggtgggac
ttggagaagcaggagaaacagctgaatcattatcagcagagcagcactctcctgcaacag
tggataaacgatgccaggaagcgccaggacacgctccaggcggtgaaactcagcgacatc
cagactctgatggaccacctcaaccagcagaaggcccttcacactgaaattaaaggaaag
caggagaaagtagaggttgtgcagaaaaacgcggacacctgcgctggctccattaaggac
tacgagctgcagctggcttcctacagttcaggcctggaaactctgcttaatattcctgtc
aacagaacgatgttgcagtcgcccgcttctgtggtcagacaagaggcggctgacctccag
tctcaatacatagagctgctcacccgctctagtgactactacaggttcctaggggagctg
ctgaagaacatggaagagctgaagatcaggaacaccaggatcgagttgatggacgaggaa
ctgaagcgtctgaaggacgacatccaggatcgcaaccagaaaaacaagtctctggaggat
actttggaccgctacaagctggagctcagtcagtcacaagaacagctctgttctatggag
gaagtgaagagattcacggcaataaaagttaacgcgaccaaggagagcctggacagcaca
cacagccagctccaagatctgaatgaagagctgatccgtatcaagtaccagctggatgaa
gaaaagaggaaaagaaggttggcagaggagcgctacaccagccagcaagaggagtatgag
gggactgttcgtcgcagacagaaagaactggaagaactcaactggagcaagattgacttg
gaaaagtctgtgaaggacaaggaacgtgaactggagaggatgaagacacagctggacgag
gaaggggcacgtcgacgaaacgctgaatcagatatatcaaagatatccatgaggatgcat
gattcccaaagccagtacagcgacctactgctggagagggacaatttgataaccaagctt
aaactgctggagcaagacaagactcgtcagctgcgcatagaggacgagctcactcgcatc
aagctcacactagagaccgagctccgcaacaagcagcggctgcaagatgaaaagagtacc
gtccttaaggatttcaactatatgaagagccagtatgagctgagagaatgccacatcaag
aagtttgaatcagacagagaccaggctgatcgggaaaggctcaacctgaagaacgagatc
gagaagctcatgagggagcttaagactgttgaggagaggtacaagagtcgtctgatgatc
tctgaaaaggaggcttcagacctggctctcaagagaattgccctggagaaagagatacag
aggctgcagaagatcgatccatccaagctgatatttgaaggggtgcgtcacaaagtcacc
gcccaccagctttgcgactgtggcataatcagtaaagccacactagaccagctcctaaag
ggaaaaaagagcgtggatgaggtagctgtggacatccagcttagtctaaagggcaccggc
atcattgctggcatgacaacatgtaaccaagggaaaatgccattcactgaagcaaaaacc
aagaatctcctcagcaaagaaagtgccatcatgcttctggaagctcaagctgcaactggc
tacatagtggaccccgcatttaatgaaaggatgcctgtagatactgcctgctcaagaggg
atcgtagacaccgaagacagggacaccctggtgacagctgaagcagctagcacaggcttc
aaagatccatacagtggcaaagtgttgtctgtgggtcaggcttgcaaacagggccgcgtc
aacaaagacacagccatccgcttgctccaggctcaagagtctgtgggaggcatattggac
cctgttctgagtgtgttccttccaagagacctggccttggatcgcaatcttattgatgag
gatctctacagggctttgggcaaaaacccgcctngctacctggagccgtcaactggagag
aagataacctataatgaccttaggaagaagtgtacagtggaacctgtttctggcctgctt
ctgctccgtggtccggaaaaggccatgacagtgaagggtctccgtggcgaagtccctgtt
gatgagctcatcaaatccgacctgctggatgaaactgatttggcgaagctcaaacagggc
aagctcagcagcagagaaattgaagacaagctaaagtcctatctctatggctctacctgc
attgcggggatctatgatgaagccaatgagcgcataatgcccttctatcaagcaatgagg
gaaggcctgctcatgagaggaaccaccctggagctccttgaggcccaagcggcttctggc
ttcattgttgatccagtcaacaatgtgttcttgacagtagaggaggcctcaaagagaagc
ctaataggaaatgagtttaagaataagcttttgtctgcagagaaggccgtaactggatac
aaagacccatccacaggaaagacaatctccctcttccaggctattgagaaagatcttatt
gagaaaggtcatggaatccgtcttctggaggcccaaattgccagcggcggaattattgac
cccaaagcgagccaccgtattgatgttgctgtcgcctacacaaggggatattttgatgag
gagatgaatgagatccttagttatgaaggagatgacacaaaagggttctttgaccctaat
actaaggagaacctgacctatcttcagcttaaggacaggtgcatgacagatcccaagaca
ggcctcatactcctgccgctcagagacaagaataagcccaagaagtcacaggagagccgc
agcaatgtccttcgcaagaggcgagttgtgatcgttgacccagacactgggctggagatg
tcagtgagggaggcctatcaccgggagctaattgactatgacactttcctggacttgtcc
gagcaggagtgcgagtgggaggaaataactatcaagggctctgatggctctgcacgtttg
gtgatagtggacaggaaaacgggaacccagtatgacatccaggactgcctgaaacgcagt
gtcatcgagcagaagtctttggatcagtatcgtgccggaacacttacgttgacccagttc
gctgaccaaataaccagcagaaccagcagcattgagatgaccattgcggccagcaatgtt
gatgacatggtcacctgcagcagtcccacccagctcgcgccttcttctcctactgttcgt
aaacgcttcaacagtatttcgatcactgtttccccccctgagatgtttgatgaccacagc
cctgtggcggctatattcgacacagagaccttggagaaaatcactttgtcagaagcgctc
cgaagaggcctcgttgacactattacaacccagaggctcctggaggcccagacatgcaca
ggtggtattatcaaccccgccaccggtgagagattgtcgctacaggatgctgtccatcag
agtgtcatcgatgacagcatggcctcaaagctgaaacctgcccagaaagcctatgttggt
tttgaggatgtgaagactaagaggaagatgtccgtagcagaggcagtgaaggagacgtgg
ttgccctatgaagcgggccagagatttttggagtttcagtacctgaccggaggcctgata
gagcccggcagtggacgacgtgtcaccatcgaagaagctatccgcacaggttggctggac
ggtcaaggggcccagaagcttcaggatacacggaaccacaagaagaacctgacctgtccc
aagaccaaactgaagatctcctacaaggaagccatggacagctgcatggtggaagaaagc
aatggtatgaagatgctgcaggcctcctcaatgtccaccaagggaatcagcagcccttac
aatgtctccaacccaggttctcgctctgggtccagggctgggtccctagccagctccagg
aatggatctcgtagaggcagtgtggattattcctccactttcagctatagcttctcctcc
aacagtgccatatag
DBGET
integrated database retrieval system
