Anoplopoma fimbria (sablefish): 129112767
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Entry
129112767 CDS
T09102
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04081
Hormone signaling
afb04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
129112767
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129112767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129112767
Membrane trafficking [BR:
afb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
129112767
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
PDC10_C
Motif
Other DBs
NCBI-GeneID:
129112767
NCBI-ProteinID:
XP_054480962
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All DBs
Position
3:23907458..23928791
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AA seq
996 aa
AA seq
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MVAVHTSPNSSPSAEWICCLDKRPSERSGEDVDIILTRLREVKAFHRFPPPLLLQICACA
FYECLEKGITLFRQGDIGTSWYAVLSGSLDVKVSETANHQDAVTICTLGIGTAFGESILD
NTPRHATIVSRETSELLRIEQREFKSLWEKYRQSLAGLLAPPYGAMESGSNNDRLTDKDN
MNSDSANKSHNKIPSEKLQRAGKVLRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWL
VLQSACVLTRSHAVGMWQTLLEEGVLNHVDQELGFQDKYLFYRFLDDEEEDTPLPSEEEK
RESEEELPETILLLAQIGPDALLRMILRKSPGQRTGDDLEIIYDELLHIKALAHLSNTVK
RELASVVIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVIYGKGVVCTLHEGDDFGKLA
LVTDSPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHEQAVLVLEKSPRAST
LGSIKYTVISGTPEKILEHFLEAMRMDIHHSEPDPAVDDFVLMHGIFMPNSQLCPLLMAH
YHATSPPGSEQERLEYALNSKRRALILALRWASTHTYLLQEEPAAISFLEELYGSLSNDS
RILRGLKDFVPDLEKIVKLHSEEAKSIKKKTLIRQFSNGDERLQKKQPIRNHDDILLKVY
CGDHTYTTIRVAVAATGREVVSAVADKLGTTDELVLVHLSSACEKQILKPNDVSVFSALS
INGRLFACPRDQLSSLTPLPDQEGPSAGSMSTFELMSSKDLAYQMTMYDWELFSCVHEHE
LLYHTFGRQSFRRTTANLDLFLRRFNQVQLWVVTEVCLCAQLSKRVQLLKKFIKIAAHCR
EFKNLNSFFAIIMGMSNPAVSRLSQTWEKLPTKFKKFYAEFESMMDPSRNHRSYRLTVTK
LEPPIIPFMPLLLKDMTFTHEGNKTFIDSMVNFEKMRIIANTIRQVRHCRSQPFNPEICQ
PNKNQADVRGYVRKLCVVDNQRALTQLSYRMEPRRT
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcggtgcatacgtctcctaactcgtctccgtcggcggagtggatctgctgtctg
gataaaaggccctctgagcgctcaggagaggatgtggacattatcctgaccagattgaga
gaggtcaaagccttccataggttcccacctccgctcttactgcagatctgtgcctgtgcc
ttctatgaatgcctggagaaaggcatcacgctgtttcgacagggagacataggcaccagc
tggtatgctgtgctgtctggctctctggatgtcaaagtgtcagaaactgccaaccaccag
gatgcagtcactatatgtactcttgggattggaacagcgttcggggagtccatcctggac
aacacgccacgccacgctacaatcgtcagcagagagaccagcgagctgctccgtatcgaa
cagagggaattcaagagcctctgggagaaatatcgtcagagcttggctggactgttggcc
cctccttatggagctatggagagtggttccaacaatgacagactcactgacaaagacaac
atgaactcagactctgcaaacaaatctcacaacaagatcccttctgagaagctgcaaaga
gcggggaaggttctccgtaatgccatcctgtccagagccccacacatgatccgagacagg
aagtaccacctcaagacatacagacaatgctgtgtaggcacggagctggttgattggttg
gtgctgcagagtgcctgtgttctcacacggtcccatgctgttgggatgtggcagacatta
ctagaagaaggggtgctcaaccacgtggaccaggagctgggtttccaggacaagtacctg
ttctaccgttttcttgacgatgaggaggaggacacaccgttgcctagtgaggaggagaag
agggagagtgaggaagagctgccagagaccatcctcctcctcgctcagattggccctgac
gcactgctgcgcatgatcctcaggaaatcgcctggtcagaggacaggggatgacctcgag
atcatctatgatgagctgcttcacatcaaggccttagctcacctctccaacactgtgaag
agggaactggcgagcgttgtgatcttcgagtcgcatgcaaaagctggaaccgtgttgttc
aaccaaggagaggaggggacatcatggtacatcatccagaagggctctgtcaatgtggtt
atctacggcaagggtgtggtgtgtacgctccacgaaggtgatgactttgggaagttggcc
ctggttacagattcacctcgagccgcctccatcgtcctgagagaggacaactgtcacttc
cttcgtgtcgacaaggaagacttcaacaggatactcagggatgtggaagccaacacagtg
cggttgaaagagcatgaacaagctgtgctggtgttagaaaagagtcctcgcgcctccacc
ctgggaagcatcaagtacactgtgatatcaggaacaccagagaagattctcgagcacttc
ctggaggccatgaggatggacatacatcacagtgaaccagacccagcagtggatgatttt
gtcctcatgcacggtatcttcatgccaaacagccagctgtgccctctactcatggcacac
taccatgcgacctctccgcctggctctgaacaggagaggttggagtatgcactcaacagt
aagaggagggccctcattctggccctgcgctgggctagcacacacacgtacctgcttcag
gaggagcctgctgcaatctctttccttgaggagctgtatgggagtttatcaaatgattcc
cggattttgagaggtttgaaagactttgtccctgaccttgagaaaatcgtcaaattacat
tcggaagaagcaaaatctataaaaaagaaaactctaatacgacagttcagcaatggggac
gaaagactgcagaagaagcagcccattaggaatcacgatgacatcctgttgaaggtgtac
tgtggtgatcacacatacaccactatccgggttgccgtggcagcgactggaagagaagtg
gtcagcgccgtggccgacaaacttggcaccactgatgagctcgtgttggtccacctcagc
tctgcatgtgaaaaacaaatcctgaagcctaatgacgtttcagtgttttctgctctgagc
atcaatggccgattgtttgcctgtcctcgggaccagctcagcagtctgactcctcttcca
gaccaggaaggtccttctgcaggctccatgtcaacttttgagctgatgagctccaaggac
ctggcttaccaaatgaccatgtatgactgggagctcttcagctgtgtgcatgagcacgag
ctgctctaccacacatttggccggcagagctttagaagaaccacggctaatctggacctg
tttctgcggaggttcaaccaggtccagctgtgggtggtcactgaggtgtgcctctgcgca
caactcagcaagagagtccagctcctcaagaagttcatcaagatagcagcacactgtcgg
gagtttaagaacctgaattcattcttcgccatcattatggggatgagcaaccccgctgtc
agcagattgagccagacctgggagaaactccccaccaagtttaagaagttctatgctgag
tttgaaagtatgatggacccatcaagaaaccaccgctcctaccgactcactgtcaccaaa
ctggaaccaccaatcatccccttcatgcccctccttctcaaagacatgacatttacacat
gagggcaacaagaccttcattgacagtatggtcaattttgagaaaatgcgtattatagct
aatacaattcgccaagtgaggcactgtagaagccaacccttcaatcctgagatatgccaa
cccaacaaaaatcaagcagacgtacggggttacgtgaggaagctctgcgtggttgacaac
cagagggcactgacgcagctctcctacaggatggagcctcggcggacatga
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