Anoplopoma fimbria (sablefish): 129113087
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Entry
129113087 CDS
T09102
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129113087 (trpc6a)
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129113087 (trpc6a)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Ank_5
YVC1_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
129113087
NCBI-ProteinID:
XP_054481200
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Position
24:complement(11878985..11888571)
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AA seq
883 aa
AA seq
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MNHRPPALHHSSRPAGYSDRPRARSRDNLLMYDDLGEENCCSGRCLGSSERLMAPISVVK
RRQALRGPAYMFSAPSVSPSEVEQRFLEAAEYGNIPEVRRMLLQVPNLNVNAVDYMGQNA
LQLAVSNEHLEVTELLLGRTDLSRVGDALLLAISKGYVRITEALLCHPAFKDAHRLTASP
AQADMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFCDCDS
CNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLANIEKEFKND
YCCLSNHCKDYVVGLLDLCRSTEEVEAILSGETDSEDSYDLPVRPSLTRLKLAIKYELKK
FVAHPNCQQQLLSIWYENMPGLRQQTTAIKLLVVLAVAIGLPGLAVAYWIAPCSRVGKVM
RSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLPNMTHLNHPGGLKLNYDPLLLYRMT
TTPFTWMEILIISWVMGMIWTEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSCRFST
LRHADLAQTYVHTHYTTLINVTLPPEIHYFTLARLYWLPSDPQLVSEGLYAVAVVLSFSR
IAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAKQNDAFT
TLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINS
SFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGMTTAIKTLLLKYVA
GHSEEKTETQLNQLGVGKDSGFGASTSKSRYQKIMKRLIKRYIIKARADKESDEITEGEL
KEIKQDISSLRYELLEEKSQNIETLDGLLRRLGEMNTPSAALP
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccgccagctcttcatcacagcagccggcctgcgggttacagtgacagg
cccagggctcggagccgcgataacctgctgatgtacgatgacttgggggaagaaaactgt
tgctctggacgatgcctcggcagctctgagagactcatggctcctatcagtgtcgttaaa
cgacgccaggctcttcgtggtccggcctacatgttctctgctccctcagtcagcccgtca
gaggttgagcagcgtttcctggaggcagctgaatacggcaacataccagaggtgcggcgc
atgctgctccaagtgcccaacttgaacgtcaacgcagtggattacatgggccagaatgca
ttgcagctggctgtttccaacgaacatctggaggtgacggagctgctgctggggaggacg
gatttgtccagagtgggtgatgccctcctgctagccatcagtaaaggttatgttcgtatc
acagaggccctgttgtgtcacccagcgtttaaagatgcccatcgtctaacagcgagccct
gctcaagcagacatgttggatgacttctatgcttatgatgaggatgggacgaggttttct
catgacgtcactccagtgatccttgcagcgcactgccaagagtacgagatagttcacacc
ctgctgagtaaaggggcgcgcatcgaccctcctcatgattacttctgcgactgcgactcc
tgtaactaccagcagcagtttgactccttcagccactctcgatcgaggatcaatgcctac
agaggactcgccagtcctgcttacctatccctgtccaatgaggacccagtgctggcagcc
ctggagctcagcaacgaactggccatgctggctaatattgagaaggaatttaagaatgac
tactgctgcctgtcgaaccactgtaaggactatgtggtgggccttctggatctgtgtcgc
agtacggaggaggtggaggccatactgagcggagaaactgactctgaagacagctatgat
ctaccagttcgcccctccctcacacggctcaaattagccatcaaatacgaacttaaaaag
tttgtggcacatcctaactgccagcagcagctgctgagtatctggtatgagaatatgccc
ggcctgagacaacaaaccactgctatcaaactgctggtggtgctggcggtggctatcgga
ctgcctggactggctgtggcttactggatcgctccgtgcagcagagtggggaaagtgatg
cgaagccccttcatgaagtttgtggcccatgcgtcatccttcacaatttttctgggtctt
ctgatcctgaatgccgcagaccgttttgcaggcaccactctgttgccaaacatgacccac
cttaatcacccgggaggactcaaactgaactatgacccgctgctgctctaccgcatgacc
acgacccccttcacgtggatggagatcctcatcatttcatgggtcatgggtatgatctgg
actgaggtgaaggagatctggagtcaggggccaggggagtacctggtcgaaccctggaac
ttcctggactttgggatgctggcaatcttcctcgcctccttcagctgtcgcttctccacc
ctgagacacgctgatttagcccagacctatgtacacacacactacacgacactgatcaat
gtcacactgccccctgagatacactactttacactggcacggctctactggttgccgtca
gatccccagctggtatcggagggcctgtacgcggtggcggtggtgctgagcttctctcgg
atcgcttacatccttccagccaacgagagcttcggtccactgcagatctctctcgggagg
actgtcaaggacatcttcaagttcatggtcatcttcatcttggtctttctggctttcatg
atcggcatgttcaacctgtactcttattatctgggggcgaagcagaatgatgccttcacc
accctagaggagagcttcaagacgttgttctgggctatatttggactgtctgaggtcagg
tccgtcgtgatcaataatgggcacaaattcattgagaacattggctacgtgctgtacggg
gtttacaacgttaccatggtgatcgtgctgctcaacatgctcattgccatgattaacagc
tctttccaggagatcgaggatgatgctgatgtggagtggaagtttgctcgggccaaactc
tggttctcctactttgaggaagggaggacgctccctgtgccctttaacctggtccccagt
ccaaaatctatgctgggaatgaccacggccatcaagaccctgctgctgaagtatgtggca
ggacacagtgaggagaaaactgagacacagctcaaccagctcggagtaggcaaagattct
ggttttggtgcttctaccagcaaatccagatatcagaagatcatgaagcgtcttataaag
cgttacattatcaaagcccgagcagacaaagagagtgacgagatcaccgaaggtgaactg
aaagagatcaagcaggacatctctagtctgcgatacgagctgctggaggagaaatcacag
aacatagagacactggacggactgctgaggaggctgggagagatgaacacaccttcagca
gctctgccataa
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