Alistipes finegoldii: Alfi_0628
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Entry
Alfi_0628 CDS
T02133
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
afd
Alistipes finegoldii
Pathway
afd01501
beta-Lactam resistance
afd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Alfi_0628
01503 Cationic antimicrobial peptide (CAMP) resistance
Alfi_0628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afd03036
]
Alfi_0628
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afd02000
]
Alfi_0628
01504 Antimicrobial resistance genes [BR:
afd01504
]
Alfi_0628
Chromosome and associated proteins [BR:
afd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Alfi_0628
Transporters [BR:
afd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Alfi_0628
Antimicrobial resistance genes [BR:
afd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Alfi_0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
CzcB_C
Beta-barrel_RND
HH_EMRA
HH_CyaD
BSH_YhbJ
HH_AprE
BSH_LcnD
Biotin_lipoyl
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
AFL77015
UniProt:
I3YJ47
LinkDB
All DBs
Position
complement(710504..711586)
Genome browser
AA seq
360 aa
AA seq
DB search
MNKRKKWIVTAVILVVFCAVLGVYRHFGPGSSASDADPAAVSAPRKKSVLNVNGLVVRPQ
SLADGITMVGNLLPDEEVDLSFETSGKIVEINFKEGSIVRKGELLAKVNDKPLLAQLSRY
EAQLKLAEDRVYRQSALLEKDAVSQEAYEQASTELAMLNADIDIVKANIALTELRAPFDG
IIGLRNVSEGAYASPSVVVAKLTKISPLKIDLFVPERYASQIRPGTPLSFTVEGRNETFR
AEVYAQESKVDIATRTLAVRALYPNTRGTLLPGRFVTVKIRLHDIPDAIAVPTEAIVPEM
GVDKVYLYKGGKAQAVEVKTGLRTESSIQIIEGLNVGDTLITSGTLQLRTDLPVKLDVVE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagaaagaaatggatcgttacggccgttatcctcgtcgtattttgtgccgtg
ctgggcgtttacagacacttcggccccggctcctccgcttcggacgccgatccggccgcg
gtgagcgcgccccggaagaagagcgtcctgaacgtgaacggactcgtcgtgcgtccgcag
tccctcgccgacggcattacgatggtcggcaacctgctgccggacgaagaggtggacctc
tcgttcgagacttcaggcaagatcgtcgagatcaatttcaaggaagggtcgatcgtccgc
aagggcgaactgctggccaaggtcaacgacaaaccgctgctggcgcagctgtcgcgctac
gaagcgcagctcaagctggccgaggaccgggtttaccgccagagcgcgctgctcgaaaag
gacgccgtcagtcaggaggcctatgagcaggccagtacggagctggcgatgctcaacgcc
gatatcgacatcgtcaaggccaatatcgcgctgacggagctgcgtgcgccgttcgacgga
attatcggtctgcgaaacgtcagcgagggcgcctacgcctcgcccagcgtggtggtggcc
aagctgacgaagatttcgccgctcaagatcgacctcttcgtgccggagcgttatgccagc
cagatcaggccgggaacgccgctttcgtttacggtcgaaggccggaacgagaccttccgg
gcggaggtctacgcgcaggaatcgaaggtggatatcgccacgcgcacgctggccgtgcgg
gcgctctatcccaatacgcggggaacgctgctgccgggacgtttcgtgaccgttaaaatc
cgcctgcacgacattcccgacgccatagccgtgccgaccgaagccatcgtgccggagatg
ggcgtggacaaggtatatctctacaaaggcggaaaggcgcaggccgtcgaggtgaagacc
ggcctgcggaccgagtccagcattcagattatcgaggggctgaacgtgggcgacacgctg
attacctccggcacgctgcagctgcggaccgatctgcccgtcaaactcgacgtcgtcgaa
taa
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