KEGG   Alistipes finegoldii: Alfi_1570
Entry
Alfi_1570         CDS       T02133                                 
Name
(GenBank) endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
afd  Alistipes finegoldii
Pathway
afd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:afd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Alfi_1570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afd03400]
    Alfi_1570
Enzymes [BR:afd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Alfi_1570
DNA repair and recombination proteins [BR:afd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Alfi_1570
 Prokaryotic type
     Alfi_1570
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S HHH DUF2400 RecR_HhH Gmx_para_CXXCG TRAFD1-XIAF1_ZnF
Other DBs
NCBI-ProteinID: AFL77910
UniProt: I3YLP2
LinkDB
Position
1756062..1756715
AA seq 217 aa
MTTKQRYDGVIAWFSEHMPVAESELHYTDPYQLLVAVILSAQCTDKRVNMTTPALFEAFP
TPFDMAAATAEDIYPYIKSISYPNNKARNLAGMARMLCSEFGGEVPSDLQQMQRLPGVGR
KTANVLGAVLWQKEVMPVDTHVFRVSNRIGLTTNSKTPLQTELTLEKNIPPHLLPVAHHW
LILHGRYVCTARAPKCGECGIAVWCRKYAADHKAPKG
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgaccaaacaacgttacgacggcgtaatcgcatggttctcggagcatatgcccgtg
gccgagagcgaactgcactacaccgacccctaccagctgctggtggcggtgatcctttcg
gcgcagtgcaccgacaaacgggtcaacatgaccactcccgcgctgttcgaggcgtttcct
acgcccttcgatatggccgcggccacggccgaggatatttacccctatatcaagagcatc
tcctatcccaacaacaaggcccgcaacctcgcgggcatggcccgcatgctctgttcggag
ttcggcggcgaggtgccgagcgatctgcagcagatgcagcgcctgccgggcgtgggccgc
aagacggccaacgtgctgggcgcggtgttgtggcagaaggaggtgatgccggtcgatacg
cacgtcttccgcgtctcgaaccgcatcggcctgacaaccaactccaaaacgccccttcag
accgagctgacactcgaaaagaacattccgccgcacctgctgccggtggcccatcactgg
ctcattctccacggccgctatgtctgcacggcccgcgccccgaagtgcggcgagtgcggc
atcgccgtgtggtgccgcaaatacgccgccgaccataaggccccgaagggctga

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