Amphiura filiformis: 140136245
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Entry
140136245 CDS
T10871
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
afil Amphiura filiformis
Pathway
afil00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
afil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
140136245
Enzymes [BR:
afil01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
140136245
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Motif
Other DBs
NCBI-GeneID:
140136245
NCBI-ProteinID:
XP_072014068
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All DBs
Position
16:56719355..56744832
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AA seq
1177 aa
AA seq
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MRAITAPHCTLICVIFMIAHPSLYVTATDIHLTDLKYTTHPMLFFNSSDIATLQEKARSS
HQKIAKLLQDATVTMISKPQYYLPALDYETFGGKWNEMYGNNLGALAMYCVLFPEDDEAF
LFAVEYMDRLAALPKWQVISTPNDEVPVAHTLTGFTTAFDFLYPVLDPKRRMIYLRKILQ
VTKEFYFYAKRRSWGSFYLQNHVATNYLALMHGSLVVAVHYRPALFWLKEAVKKFERTMT
LLNHIVDGSLDEGVPYGSYTSRSVTQYIYLVRRHIDIDHTKDFWIRQHFWYYYNTVMSNV
QRTVGIGDSNNNWFYGPESQLVFLDNYVLRNGYGNWLANEIRKQRTKNTSEKLGPAQHQL
WSTLHTEFVWFNDAIPNKAPSKYGQQDIHVFNDWGVVTFSTKSTNVRNDTFFAFKSGKLH
GRAVFDVVQRGMYSSWVKGWRSFNPGHEHPDQNMFVFAPSGHLFITDGLYAPKFTYLNNV
LTFSPSPTSRCFQPWEGQLGECDKYLRWTDPSTKRYGGELIGAILENGMVFTSGEVVEAY
SSAMKLESVYRSLVLINPDILVILDHLKSKSTSPITHFSAFFHNLGTSFEQDKYKKFSGV
KIPTSDGPMQMFWLNDRGESPKAELPKKSRDHTSNYQARETNYVNITMKMSSKTINRVAY
VLLGPSATLKDIRFVDRRGTGTTLLVTTNQESYNVAIATTHSNPVSRQSYLGNPGFANVK
LTNGTVIHFGVNSSQLIPYEDVNKSVTTARLSFSITPYFQCMFVLLWFALIVYRIKNKNR
LRKSRRRVLLLINVCLTVFVIAIIGTSHGILTCESSPLTNALPSVVITSLPGSGAELIGW
LFYYNPDLAYAEAPSYVVEVPRDGNFQMNPLADACYWTEEDLQEYPILTSWVEALFADLS
TMLLSKKRNWETNFKKRCLQSETFNVRHLLQTEDDSPDVSGDILFKAFTQDDLLNHVKEH
PGAQTVLHLTSGSWGLKLHWLYGILGHNMRAIHVIRDPRAWVANFLRNGHNLYQEFAVQQ
ELSVMFKQSNRTCVPRGRYAKEYNPLWIELRKQSRGVQLHLQLAHLWEANTHAVLTNLMT
LPATNARIVRYEDLVMDSQGSAEVVYDFIGYPLRPAMIHQLLQATHSGVYRTSYEGVISE
ETLTVWQQELTDEQIKDIETVCGELMDKLKYKKIMDS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcaattacagctccacactgcacactcatttgtgtgatcttcatgattgcacat
cccagcctgtatgttacagcaacagacatccacctgactgacctcaagtatacaactcac
cctatgctattcttcaattcttccgacattgctacattgcaggagaaagctcgctcttca
catcaaaagatcgccaaacttcttcaagatgccaccgttaccatgataagtaaaccacag
tactatttacctgcgttagattacgagacgtttggaggtaaatggaacgagatgtacgga
aataatcttggtgcattagcaatgtattgtgtgctgtttccagaggatgatgaagcattt
ttatttgctgttgagtacatggacagattggctgctctaccaaagtggcaggtcatcagc
acaccgaacgacgaagtgccagtagcccatactctcacaggattcaccactgcatttgat
tttctataccctgtactggatccaaaacggcgaatgatatatcttcgaaaaatacttcaa
gttacaaaggaattctatttttatgcgaagcgtcgttcttgggggagcttctatttgcag
aatcatgtggctacaaattacttagcattgatgcatggaagtttagtcgtagctgtgcat
tacagacccgctttattttggttgaaagaagcagtgaaaaaatttgaaagaacaatgacg
cttttgaatcacattgtagatggttctcttgatgagggtgtcccatatggcagttacact
tcacgatcagtgacgcaatatatttaccttgtccgtaggcacattgatattgaccacacc
aaagatttttggattcggcaacatttctggtattactataacaccgttatgtcaaatgtt
cagcggacagttggtattggagatagcaataataattggttttatggcccagaaagtcag
ctggttttcctagataattacgttcttagaaatgggtatggaaattggttagcaaatgaa
atacgaaaacaaagaactaagaatacttcagagaagttaggtccagctcagcaccaacta
tggagcacccttcacactgaatttgtgtggtttaatgatgcaatcccaaataaagcaccc
tctaaatatgggcaacaagatattcatgttttcaatgactggggtgttgtaacatttagt
accaaaagcacaaatgtaaggaatgatacattcttcgctttcaaatctggcaaactgcac
gggcgtgcagtgtttgacgtggtccagcgtggtatgtattcatcttgggtcaaaggttgg
agaagttttaatccaggtcatgagcatcctgatcaaaacatgtttgtctttgcaccaagt
ggacacttgtttatcactgatggcttgtatgcaccaaaattcacctaccttaacaatgtg
ttgacattctccccctcgcctacaagtagatgcttccaaccttgggagggtcagcttggt
gaatgcgacaagtatctgcgttggactgatccaagtacgaagagatacgggggtgagcta
attggtgctattttagagaatgggatggtgttcacaagcggtgaggtcgttgaagcgtac
agcagtgcaatgaaattagagtcagtctacaggagtttggtgcttataaacccagatata
ttggtcattttagatcacttaaaatccaagtctacctcgcccattactcatttcagtgct
tttttccataatcttggaacatcttttgaacaggataaatacaaaaagttctctggggta
aaaataccaacatccgatggtccaatgcaaatgttttggctcaatgacagaggagaaagt
cctaaagctgagcttcccaagaaaagtcgggaccatacttccaattatcaagctcgcgaa
acaaactatgtcaacataacaatgaaaatgtcgtcaaaaacaatcaacagagtagcttat
gtgttgctaggaccatcagcaactttaaaagacatcagatttgtagatagaagaggcact
ggcaccacactcttagtgacaactaatcaagaatcatacaatgttgccatagcaacaact
catagcaacccagtgtcacggcagagttatcttggaaaccccggatttgctaatgtgaaa
ttaactaacggtactgtgatccattttggtgtcaactcaagtcagctcattccatatgaa
gacgttaataaatcggtcactaccgcaagactttctttcagtattactccatattttcag
tgcatgtttgttttgctttggtttgcattgattgtttacaggataaaaaacaaaaacaga
ttgagaaagagtagaagacgtgtgttattgctcatcaatgtctgtttgacggtgtttgtg
attgcgatcattggcacaagtcacggaatcctaacatgtgaatcaagtccgcttacgaat
gcattaccatcagtggtcattacttccttaccaggatcaggggcagagctgattggctgg
ctgttctactataatcctgatttagcgtatgctgaagcgccatcttatgttgtagaagtc
ccaagagatggaaatttccaaatgaatccattagcggatgcatgttattggaccgaagaa
gatttacaagaatacccaattttgacatcgtgggtggaggctttgtttgcagatttatct
actatgttattgtcaaagaaacggaattgggaaaccaatttcaagaaacgttgccttcaa
agtgaaacctttaatgtaagacacttgttacaaacagaagatgattctcctgatgtgtca
ggggatatacttttcaaagcattcactcaagatgatttacttaatcatgtaaaagagcac
cctggtgctcaaacagtactacatctcaccagtggcagttggggtttaaaacttcactgg
ttatacgggatactagggcacaacatgcgagctatccatgtcatacgagacccacgtgcg
tgggtagcaaactttctgcggaacggtcataacctgtaccaagagtttgcagtgcagcag
gaattaagtgtaatgttcaagcaatccaatagaacatgcgtacctagagggcgctatgcc
aaagaatataatccgctatggattgaactgagaaagcagagtcgaggagtgcagcttcat
cttcagttagctcatttgtgggaagcaaatacacatgcagtgttgactaatttgatgaca
ttgcctgcaaccaatgcaaggattgtacgatacgaggatctggtgatggattcccaggga
tcggcagaagttgtctatgacttcattggttacccacttcgtccagcaatgatacaccag
cttttgcaggcaactcacagtggtgtctatcgcacatcgtacgagggcgtaatatctgaa
gaaacactgactgtgtggcagcaagagttaaccgatgaacagattaaagatattgagact
gtgtgtggtgaacttatggacaaattgaaatacaaaaagattatggacagttga
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