Amphiura filiformis: 140143748
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Entry
140143748 CDS
T10871
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
afil Amphiura filiformis
Pathway
afil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140143748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140143748
Membrane trafficking [BR:
afil04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
140143748
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF2358
Motif
Other DBs
NCBI-GeneID:
140143748
NCBI-ProteinID:
XP_072021663
LinkDB
All DBs
Position
Unknown
AA seq
702 aa
AA seq
DB search
MTDTKEDKRVEELLPVGQFLPSELMNENPSTETRTPHSPSVTSNGDGHPNPVSSQFEEID
SINVNSTSTETDQQSSKTHQDGADDKSDSSTEYQDTINNGSNNTSGCVEEVPYNKDDGLD
SSQETANGLLEGENTTLLANESVAESPNEGDGTSDSPYQETTSDCDNKDANTTLHANGSV
DEHMANNEMDRSDSSTQYQDTAEYHEEVNETLHTKESVEETLNERDEDLVTTPTSQYPMF
SSHTSPEKVSPVSLNFEFDRPRDTCIKIVLPNTHDCPVYALVLCSWDNILGPNAQYVWGT
EQKHGFTPDMLNYLSTHTLTSSDQPENTVDTKMLILKERGILVTSFLFSGYDGIEKTVFS
LSLIVPYVECQWYLPLHEFCVSRLSMMIGKLRVLQDKHKEEVGELAIKSFNEDVPKFIGV
LTLLKTSSPGPIIQLSDTVFAAGLDNTLDVQFTRLAIASHLQTCGCTIVIGNSVSDINMM
ISTLAMFLSPGERRGCIYLTEGEERVYEKDLYLQGFLKDHINLSECMREVMVSSYPSTLV
DMVTLEVRQMLPYNEHAYWRHEVLCHELQSLWLDSQEPMVYLPIVTFQNKCETETLVQNF
QREINLLHPRSGVREAYIEQFQRLLDRKAVGLIKYVEEETMRGSKTSRITIKKLKHDLDL
NPEGNFRIILARAEKLKPGIFTIVCGNPAQMKDPSLQELPMT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactgataccaaagaagacaagagggtggaggaactgttgcctgttggccagtttcta
ccatcagagttaatgaacgaaaatccttcaactgaaacaagaactccacattctccatca
gtaacttcaaatggagatgggcatccaaacccagtatcttcccaatttgaagaaattgat
tccatcaatgtgaattcgacttccaccgaaactgaccaacagtcttccaaaactcaccaa
gatggggctgatgacaaatcagactcttccactgaatatcaagacactattaataatggt
agcaacaacaccagtgggtgtgtggaagaggtgccttataataaggatgatggattagac
tcttctcaagagactgctaatggtttgcttgaaggtgaaaacactactttgcttgcaaat
gaatctgttgcagagtctcccaatgaaggagatggtacatcagactctccttatcaagag
actactagtgattgtgataacaaagatgcaaacactactttgcatgcaaatggatccgtt
gatgaacacatggctaataatgaaatggacagatcagactcctctacgcaatatcaggac
actgctgaatatcatgaagaagtaaacgaaactctacatactaaagaatctgttgaagag
actcttaatgaaagagatgaagatttagtcaccacccccacttcacagtatcctatgttt
agctcacacacaagtcctgagaaggtatctccagtgtcattgaattttgaatttgacaga
cccagagacacttgcatcaaaattgttctacccaacacacatgactgtccagtatatgcc
cttgtactgtgctcatgggataacatcctaggtccaaatgctcaatatgtctggggaact
gaacaaaagcatggtttcacaccagatatgttaaattatctatccacgcacaccctaaca
tcaagcgatcagccagagaatacagtggacacaaagatgttaatactgaaagaacgaggc
atcctagtgacatcgtttttgttcagtgggtacgacgggattgaaaagacagtgttttca
ttgtctctaatagtgccttatgtggaatgccaatggtatttaccattgcatgaattctgt
gtgtcaagactgagcatgatgattggaaagctacgtgtattacaggataaacacaaagag
gaggtcggggaacttgcaatcaagtccttcaatgaagatgtgcctaaattcataggtgtc
ctcactttacttaagacatcaagccctggaccaataatacagctgagtgatacagtgttt
gctgctggactagacaacaccttagatgtgcaattcactagattagctatagcttcccat
cttcagacatgtggttgtacaatagtgattggcaattctgtttccgatataaacatgatg
atcagtactctagccatgttcctgtctccaggggaaagaaggggctgtatatatttgaca
gaaggagaagaaagagtgtatgagaaagatttgtatctgcaaggctttcttaaggaccac
atcaacttgtctgaatgtatgcgagaggtgatggtcagctcatatcccagtactcttgtt
gacatggtaacgcttgaggtccgtcagatgttaccctataatgagcatgcctactggcga
catgaggtactatgtcatgaactacaaagcctatggctggatagtcaggaacctatggtg
tatcttccaattgtgaccttccaaaacaaatgtgaaactgagactttagtacaaaacttc
caaagagagatcaatcttctccatccacgtagcggagtgcgtgaagcatacatcgagcaa
tttcagaggctactagataggaaagcagttggacttatcaaatatgtggaagaagaaaca
atgaggggcagtaaaaccagtcgtatcaccatcaagaaactcaaacatgacttggacctc
aatcctgagggtaacttccgcattattttggcaagagcagaaaaactgaaacctggcatc
tttactatagtatgtggcaacccagctcaaatgaaagacccatctttacaagaactacca
atgacctaa
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