Amphiura filiformis: 140148891
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Entry
140148891 CDS
T10871
Name
(RefSeq) uncharacterized protein
KO
K10260
F-box and WD-40 domain protein 7
Organism
afil Amphiura filiformis
Pathway
afil04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140148891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140148891
04121 Ubiquitin system [BR:
afil04121
]
140148891
Membrane trafficking [BR:
afil04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
140148891
Ubiquitin system [BR:
afil04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
140148891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
F-box-like
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
F-box
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Nup120_160
WD40_like
DUF4508
Beta-prop_IFT140_2nd
F-box_4
Motif
Other DBs
NCBI-GeneID:
140148891
NCBI-ProteinID:
XP_072027090
LinkDB
All DBs
Position
3:complement(61846497..61872629)
Genome browser
AA seq
851 aa
AA seq
DB search
MDGAHQHIGTSSDSEGPAVRPPIKRVKSKSRVWERVSWFSRKSRTTKEGHIELSLTGEEG
GAAAIPDQMEVDDMPSSSSGPSPRPLSDYSSSSEGDIASLSLRTAGHNNGKKSNSSSRYS
NSEVVYQNCVKPSLVKVMFGKADNNVCSTRIHIPRRTTKKKIEQMNLSDDDEDEDELEAS
KCHHHTRNQLNDSSKLKNAWFDGNRHAPCHCPACCSCRHSSEAINFASWPRKRTCPLQVS
LRLCRADVPMAVKHSPSTSRKDMVAGPTCSKASWCPSGDITMSNLSLHADQPWAAKKRVQ
GEQARRCCCPRRVEYGRKSLSLPAGASLDSYSLDKLDTTSFSAIEHSEVECMVTVDSASD
HELPLQDEQNCQRKQSAICNQDNPKCNHGEGGDHQHQQSSLTWNKGVDGSVFKQRMQVIG
EWFGEFNDQQKNVMMKRLLEQCDLPQMHMLSVTMEPILHQSCPHNCQDLLSWLPSQLSLR
ILSYLDPVSLCRCASVSRAWYELANEPTLWRTQCRLLKWRLTQAEEQKQMINHMSSYIHW
KLVFFFRYRLRRNWLKGLCTVRTFEGHTQGISCVQFDDTRIVSGSSDKSIKVWNIRTNSP
WSVQTLVGHSGTVRCLHLEGNRLVSGSTDRTIKVWDLSMQNSWSSIACKVTMTGHQDTVR
CLQVDYEKVVSGSYDRTLKVWDIRTGRCKLTLRGHTGAVLCLQFDSSKIVSGSVDKTIKL
WSLDSGTCLSTLTGHQDAVTCLQFDANKIISGSLDSNLKFWDLHTGQCTSTIDWAHSEGH
TGVIRCLQADVWRVVSAADDRTLKVWSIETGERLVTLRHHRDGVTCLQFNNSKIVSGSYD
KTVKLWDFSTV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgcgcaccagcatataggtacatcaagtgattccgagggccctgctgttaga
ccaccaatcaaacgtgtgaaatccaagtccagggtttgggaaagagtatcgtggttcagc
cgtaaatcacgaactaccaaagagggacatattgaactttctttaactggagaggaagga
ggtgctgctgctatacctgatcaaatggaggttgatgacatgccttcgtccagttctgga
ccatctccaaggccattgtcagattacagctcctcaagcgaaggagacatagcgtcttta
tcgctaagaactgctggccacaataatggcaagaaaagtaatagtagtagcagatattcc
aacagtgaagtagtgtatcagaattgtgtaaaaccaagtcttgtcaaggtcatgtttgga
aaagcagataacaatgtgtgctccacaagaatacacataccacggcggacgacgaagaag
aaaattgaacaaatgaacctgtcggatgatgatgaagatgaagatgaactggaggcttca
aaatgtcatcatcatacaagaaatcagttgaatgactcctcaaaactgaaaaatgcatgg
tttgatggtaatagacatgcaccttgccactgtccggcttgttgctcgtgccgccacagc
agcgaagccatcaacttcgcaagctggccacgaaaacggacatgtccgcttcaggtgagc
ttacgcttgtgtcgagcagacgttcctatggctgtcaaacattcgccgtccacttcaagg
aaagacatggttgcagggcctacatgtagtaaagcatcatggtgcccttcgggggatatc
acaatgagtaatctttcgctacatgcagaccagccctgggcggcaaagaagcgtgttcaa
ggggaacaagcacgcaggtgctgctgccctcgtcgcgttgaatatggaagaaagtcgcta
agtttgccggcaggagcctcgctggactcttattcattagataaattagacacaacgtct
ttcagtgcaatagaacattctgaagtggagtgcatggtgaccgtggacagtgcatcggat
catgagctgccacttcaagatgaacagaactgccaacgtaaacaaagcgccatatgtaat
caagataatccaaagtgcaatcatggtgagggtggggatcatcagcatcagcaatctagt
ctgacatggaacaaaggtgtggatggatctgtgtttaaacagagaatgcaggtgataggc
gagtggtttggtgaattcaatgatcaacagaagaatgttatgatgaagaggttgttggaa
caatgtgatttgcctcaaatgcatatgttgtcagtaaccatggaacccatcttgcatcaa
agctgtccacataactgccaagatcttctgtcatggctgccatcacaactctcacttcgt
attctttcttatttagacccagtaagtctttgtagatgtgcatcagtaagtcgtgcatgg
tacgagttagccaatgaaccaaccctatggaggacccaatgtagattactcaaatggaga
ttgactcaggctgaagaacaaaagcaaatgatcaaccacatgtcatcctatatacattgg
aagcttgtttttttttttcgttacagactacgacgtaactggttgaagggtctttgtaca
gttaggacctttgaagggcacacacagggtatatcatgtgtacagtttgatgatactagg
atagtcagtggctcctcagataagagcatcaaagtatggaacattcgtaccaactcacct
tggtcagtgcagacattagtgggtcattcaggcactgtaagatgcctacatctagagggt
aatagactggtgtcaggatctacagataggactatcaaggtatgggacttatccatgcag
aatagctggtcaagcatcgcatgtaaagtgaccatgactggacatcaggacacagtgaga
tgcttacaggtggactatgagaaggtggtcagtggctcatatgataggacattgaaggtg
tgggacatcaggacaggacgctgcaagcttacattaaggggccacactggtgctgtatta
tgtctgcagtttgacagcagcaaaatagtatcggggtcagtagacaaaactataaagcta
tggagtttggattccggcacttgtttgagcactcttactggccatcaggatgcagtgact
tgtctacagtttgatgccaataagattatcagtggttctctggacagtaatcttaagttc
tgggatctacacactggtcagtgtactagtaccatagattgggcacactcagagggacac
actggagttatcagatgtctgcaggccgatgtttggcgtgtggtgagcgcagcagacgac
agaacattaaaggtttggagcattgaaacaggagaacgtctggtgacactgagacatcac
agagacggggttacatgtctgcagttcaacaatagcaagattgtatcagggtcatatgat
aagacagtcaaactttgggatttcagcaccgtttag
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