Amphiura filiformis: 140150869
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Entry
140150869 CDS
T10871
Name
(RefSeq) transient receptor potential-gamma protein-like isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140150869
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140150869
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_5
Ank_3
Ank_4
TRP_2
Motif
Other DBs
NCBI-GeneID:
140150869
NCBI-ProteinID:
XP_072029116
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Position
4:complement(38940395..38961239)
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AA seq
856 aa
AA seq
DB search
MASLKSLTKSDLTRAQSSTRKVRWSWASSIMSGDHTTVEHQKVLFDAIEKGDIGAVSEMI
LADDLHEYDAWSSSPDINLPNENNETGFSIAVKAKDLEMASLLLKCGANVRGGLLTAVET
ANEPMVRMILEHLKEKRITLKATVDAFGEDKDYLTPTTPLMYAARHKYHDIVKVLVEYGA
VVPDLEVVLNRTQRDKYEANHVCLYWHQAVTSEAYLVYAKEDPIQAAIDAGKLLRKNQRT
LLQHRKTECQELTENLDEFLVKYMAVARNGEEIEDLIWKDVPTGNKRTKGRGILPSRLRD
AMELDFKRFISGQSCCHFVRLEWYGTWLGMSRLSFILWTLLVIVAQPIICLVYIVVPLQN
IRSLVKTPFVRFILNCVSKLYFIGFLIFLNISWVFDVSADSHRFCQIKFWFTDAPIVGFY
FFYAWLFGMTWKVMRDMITGGFRRFWSNAFNWIDTIQIILYWISTALFWVSYSYQTQPEN
LVAWDRYIEDMSGGTITCLQDEQAGVVFAAGDGTASEDNPTTGKAAGYNSENNDEDYSVS
KLFYNELNPLLLSEVFFAVATILSFLSLFREMIANFFVGPLRVSLGGMITDIIRFIIIFV
FIWISFAMGMRQLYQSYNIVTAIHCLDPEGCVTAPFEGLPRTMEALFWSIFNPLDTSQLH
VNGDLAMIGIIGEILYAIYMVVVVVVMLNALIAMMADTYERVAKNSETEWKVERTQLMAY
YMHKTTTLPPPFNVIPTVYSIIKAVCWPCRRNQSQAKMQRLEEVEMRATLGRHNRNYETF
IKKITERYANVHFDNEYTDLTQKHETQQMKSEIALLKEALHGIQSELMKNQQILKNMTTN
RKGSESKRMSWSIKKK
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggcatcattgaaatcgttaacgaagtctgatcttacacgcgcacaatcgtcaaccagg
aaagtgcgatggagttgggccagctccatcatgtcgggggaccacacgactgtagaacac
caaaaggtgctcttcgatgccatcgagaagggtgatatcggtgctgtatcagaaatgata
ttggccgatgatctgcatgaatacgatgcctggtcttcgtcgccagatatcaatttacca
aacgaaaacaacgaaactggcttttcaattgctgttaaagcaaaggatcttgaaatggcg
tctcttctactgaaatgcggtgctaatgtacgtggagggttattgacagcggtggaaact
gcaaatgaaccgatggtgcgaatgatattggaacatctcaaggaaaaacggattacatta
aaagcgactgtcgacgccttcggagaagacaaagattatctgacaccaacgacgccattg
atgtatgcagcgaggcacaagtatcatgacatcgttaaggttctggttgaatatggtgca
gtagttcctgatcttgaagtagtccttaatcggacccaacgagataaatacgaagccaac
catgtatgtctctactggcaccaagccgtcaccagtgaagcttacttagtctatgccaag
gaagatccgatccaggctgccatcgatgcgggaaaactgttacgaaagaaccaacgaaca
ctacttcaacatcgaaagactgaatgccaagagctcaccgaaaacttagatgagttcctt
gtaaagtacatggcggttgcgaggaatggagaagagattgaagatctgatttggaaggat
gtaccaacaggcaataagaggacaaaaggtagagggatattaccgagtcgtttaagagat
gcgatggagttggatttcaaaagattcatttctgggcaaagctgctgccattttgtgcga
cttgaatggtatggtacttggttaggaatgtcacgcctgtcatttatactatggacgttg
ctcgttatagtcgcccaacccatcatctgtcttgtctacatagtggtaccgttacaaaat
atacgttcactggtcaaaacaccattcgtccgattcatcctcaattgtgtgtccaagctc
tacttcatcggctttcttatttttctgaacatttcctgggtgtttgatgtatctgctgac
agccacaggttctgtcaaatcaaattctggtttacggacgcccccatcgttggcttctat
ttcttttatgcgtggctttttggaatgacgtggaaagttatgagagacatgataaccggg
ggatttcgtcgattttggtcgaatgcattcaactggatcgataccattcaaatcatactt
tattggatttctacagcactgttttgggtttcctatagttatcaaactcaacctgagaat
ttggttgcatgggatagatacatcgaagacatgagcggtgggacaataacttgtcttcaa
gacgagcaagctggggttgtatttgctgcaggagatggaacggcatctgaggacaatcct
accacaggaaaagccgctggatataacagcgagaacaacgacgaggactactcagtgtct
aaactattctataatgaactgaacccactcctgctgtctgaagtcttctttgctgtggct
actattctgtcattcctgagtctttttcgcgagatgattgccaacttcttcgtcggtcct
ttacgcgtctccttaggggggatgatcaccgatatcattcgatttatcattatctttgtg
tttatatggatatcatttgcaatgggtatgaggcaattataccaatcttacaacatcgtg
acggcaattcattgtcttgatccagaaggctgtgttacggcaccatttgaaggattacct
cgcacaatggaagcactgttctggtctatttttaatccactcgatacatcacaacttcat
gtgaatggcgatcttgccatgataggaattattggagagattctctacgccatctacatg
gttgtcgtggtggttgtcatgttgaatgcgctcatagcaatgatggccgatacctacgag
agagtcgcgaaaaacagtgaaacagagtggaaggtagaaaggactcagctgatggcatac
tacatgcataaaaccaccacactcccaccaccttttaatgtcatcccaaccgtctactca
atcatcaaagctgtatgttggccgtgcagaaggaaccagagtcaggccaaaatgcagagg
ctagaggaagttgaaatgcgagctactctgggtcgacacaacaggaactacgaaactttt
ataaagaaaattaccgaacggtatgccaatgtccattttgataacgagtacaccgatttg
acccagaagcacgaaacacaacaaatgaaatctgaaatagcactcctgaaagaagcacta
cacggaatacaatctgaattgatgaagaaccaacaaatcttaaaaaatatgactacaaat
cgcaaaggatcagagagtaaaagaatgtcatggtcgattaagaaaaaatag
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