Amphiura filiformis: 140152028
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Entry
140152028 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140152028
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140152028
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ion_trans
Ank
Ank_3
Ank_4
Ank_5
DUF1218
TRP_2
DUF3438
Motif
Other DBs
NCBI-GeneID:
140152028
NCBI-ProteinID:
XP_072030429
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All DBs
Position
5:16811752..16837246
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AA seq
815 aa
AA seq
DB search
MNNTNVQAEFLKAVEMNDVATVALLLQSSQRNEISLDVNAPNGDQQTPLVVAITSKHMEL
TSLLLGHGANSDDTLFYCIDTGCETMVKLICEHLKATSQDSLHRTLNTISTDENMKAVSS
PLMYAAREDSQEIVKTLIEYGAEMPDLQTVLDHSKGDTYEQYLTCYSWHQAISSEAYLLY
ASNDPIQAAIDAGKAIRKSCSVQKQHLRSKYENLITRLDLFITKLFAMASSEDEIGALLW
NREDNFNEEIFAQVGVLPQRIHDSLDLKYKQFISSTACTHFLLDQWYMRWKDLSVLHFTI
WTAIVIIFQPVLCIGYLLLPFMWHRRIMKTPYVRFLLHWVSRIYFICLIVYCTLQEDGTS
TTINFTESEVQRINQILKYLTFSIESTDILPVAILVYIWILGMTWREIRELCNGGFWNYW
TDFFNYTDILQLILYWSALICYILSYNKVTDDVEYVCGLLSDIVQQADVGWSNYNVSDGF
YVLLEEYTQEFTICDRFLAKGLTKRDTDEQVSFSMDPNDNVLMGDALFGVATVLSFLALM
RDFDIVRFVGPLRVSFGRMISDMVRFVILFLFVWISFALGMTMLYSTYDTIETANCYHRD
DYSCNLSAFTEFYVSLDKLFWSIFDSIDEEDIHLKSQYKITSIVGEVLYAVYRILVAVVM
LNALIAMMSNTYTRVEENSDIKWKVARTNLMARYMANTTLPPPFNLLVTLKTVLNWIIAG
CRRRCRHYLSDYHQPKNEIYDETVDFQKTTSYKTLVKTIVDRFVGTYVDSDDEIPGIRYS
ATKLSREMTEMKDSLKTMEKKIELILQVIQDHPST
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaataacactaatgtgcaggcagaatttctaaaggctgtagaaatgaatgatgtcgcc
actgttgcattactgctacaatcttcacaacgaaatgaaatcagtttggatgtgaatgca
cctaatggtgatcagcagacacccctggttgtagccattacatcgaagcatatggaacta
acatcattgttattgggacatggcgccaattcagacgatacattgttttactgtatagac
acaggatgtgaaaccatggtgaaattaatatgtgaacatctcaaagctacatcacaggat
tcactgcatagaacattgaatacaatatcaactgatgaaaatatgaaagctgtgtcgagt
ccattgatgtatgctgccagggaagactcgcaggaaattgtgaagactttaatagaatat
ggtgctgaaatgccagatctgcaaaccgttctcgaccactccaaaggagatacatacgaa
caatatctaacctgctacagctggcatcaagctatatcaagtgaagcatatcttctgtac
gcatctaatgaccccattcaagcagctatcgatgcaggaaaggctattcgaaagagctgt
tctgtacagaaacaacatcttcggtcaaaatatgagaacttgataacacgccttgatctg
tttattaccaagttatttgcaatggccagttcagaggatgagattggtgcattattgtgg
aatagggaagacaatttcaacgaggaaatatttgctcaagttggtgtactaccacaaagg
atacatgactcgcttgatctcaagtataagcagtttatctccagcactgcgtgtacgcat
tttcttctcgaccaatggtacatgaggtggaaggacctgtctgttctccattttactatc
tggacagcgatagttatcatctttcaaccggttctttgtattggttaccttctactccct
tttatgtggcatcgacgaataatgaagacaccttacgttcggtttttgttacattgggtt
tcccgcatctacttcatatgtttaatcgtgtattgcacattacaagaagacggtacaagt
acaacgatcaactttacagaaagtgaggtccaacgaatcaaccagatcctcaagtattta
acattttctatagaatctacagatattctacctgtagcaatattggtctacatctggata
ttaggtatgacatggcgtgaaatccgtgaattgtgtaatggcgggttctggaattattgg
actgatttcttcaactatactgatatcctgcagcttatactctattggtcagcattgata
tgctacatattgtcatataataaggtgaccgatgatgtagaatatgtttgtggattgctt
tctgatattgttcagcaggctgacgtaggttggtccaattacaacgtttctgacggtttt
tacgtactacttgaagaatatactcaggagtttacgatttgcgacagattcttggcaaaa
ggtttaaccaaaagagatactgatgaacaagtatcattcagcatggaccccaacgataat
gtcttaatgggagacgctctcttcggtgttgctaccgttttgtcgtttttggctctcatg
agagattttgacatcgttcgttttgttggcccactcagagtatcatttggaagaatgatt
agtgatatggttcgttttgtcatccttttcctattcgtttggatttcttttgctcttgga
atgacaatgctttactcaacttacgacactatcgaaacggcaaactgctatcaccgagac
gactactcgtgcaacctgtctgctttcactgagttctatgtttcacttgataagttgttt
tggtctatttttgattcaattgacgaagaagacattcatctaaaatcgcaatataaaata
acttctatagtaggggaggtgctctacgcagtttacaggatacttgtggctgtagttatg
ttaaatgcactgattgccatgatgagcaacacatatacacgtgtagaggaaaactcagat
ataaagtggaaagtggctcgaacaaatctaatggcgcgttacatggctaatactacactt
ccgccgccattcaacctgttagtaacattgaaaactgttctcaactggattattgctggc
tgtagaagacgatgtcgtcattacctcagtgactatcaccaacccaagaacgaaatatat
gatgaaacagttgattttcagaagacaacgtcatacaagacattagttaaaaccatagtt
gatcgctttgtcgggacgtatgttgactctgatgacgaaataccagggatacgttatagt
gcaacgaaattgtcacgagaaatgaccgaaatgaaggattctttgaaaacaatggagaag
aagatagagttgattctacaagtaattcaggatcatccctccacttaa
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