Amphiura filiformis: 140153193
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Entry
140153193 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afil01009
]
140153193
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140153193
Protein phosphatases and associated proteins [BR:
afil01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140153193
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140153193
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank_4
TRP_2
STX6_10_61_N
TPR
Motif
Other DBs
NCBI-GeneID:
140153193
NCBI-ProteinID:
XP_072031974
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All DBs
Position
5:44195081..44212670
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AA seq
849 aa
AA seq
DB search
MAMPPTLVTEYFSAIVENDIEIVQELLDGCDGENAVDIDAVASDGSTALQVALEHKYYEL
GDKLINRRIKGGLTLLRMIEVDNPKAVEYLCKKHKDFKSNREDIFSSRTSDDEFPPETTP
VTLAARLNRYEILKILMQYGAIMPTLDEVRRQFSNKRPGRERAILQLCEARASEAYLLQT
SQDILSNIFRLTQELQDIRREEKNSLEKLGCRDEYTDLEERLRIMAEKVVDYTNAEELET
LLKGTDAERSAPQVAAFCGKGQSQKLPIRIAQALQLRFKELIAHKKLQEWLWRQWRYGFS
QHIDRSHVRRILVTTLFFIFWPIFSVLYLLLSGFTFFEPFVRILKTPYVKFILHASSRVS
FLFILILRGFVKQPAVFVLNISNDTLAETDTIRQDYIAYKSHAYTIPGLIFLWIAGMTWR
ELTRLRDQGAKMYMDVGSSLVDVPQIFLYWIYLIFASIAHTQAGRVVSQAGWLKKVTSAM
SVTMICDSEPSTSSNCTSIYEESRFDWHSHEPILIAEAAFAVANVFTFVRLLDITVLIAG
LGALQVSFKKMFRPIFKFLALFSFVWLSFSLGTTQLYRSFEDAMLELCEHNHRIDETHDC
PDNEPHFTTLWISLTSYFWMLFGQGGLNYFSLPHNLRFTEDIGWLIYALWHIAVVMFLMK
ILIGLTSSVYAKIERNADMEWKFARTKMVSEYMMDTAVVPPPFNIVPSTASIVRCCKTIL
NAIDQGRTVTDEVELERRRTKTIRLEERQQKKAIRLTHNYKMISGIVRRRYARSVMKSQH
KIAPPREKTQRFKAQQQETGSGTPDSSEDIRRIQKTCDSLASDLKDLQQTIDTLVKTLQD
PRTAADEST
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgccacctacattggttactgaatatttttcggctatcgttgaaaatgatatc
gaaatagtgcaagaattgttggacgggtgtgacggggagaatgccgtggacatcgatgct
gtagcttctgacggtagcacagctcttcaagtcgcattggaacacaaatattacgaactt
ggtgacaagctgatcaaccgtcgaatcaagggtggtttaacattgctccgtatgatagag
gtggacaaccctaaggccgtggaatacctatgcaaaaaacataaagactttaagagtaac
cgggaagatatcttcagctcccgtacctctgatgatgagttcccaccagaaacaactccc
gtcactttagctgcaagattgaatcgatatgagatactaaagattctaatgcaatacggc
gccataatgccgacactggatgaagtccggcgtcaattctctaacaagcgtccaggaaga
gaacgggctatattacagctatgtgaagcccgtgcatctgaggcctatctattacaaact
agccaggacattctcagcaacatctttcgtcttacacaagagttacaagatattcgacga
gaagaaaagaacagtttggagaaacttggctgcagggatgagtacactgatttagaagaa
aggctgcgcataatggcagagaaagttgttgattatacgaatgcagaagagttagagact
cttcttaaaggaactgatgctgagagatcggcaccacaggtggccgcgttctgcggaaaa
ggccaatcacaaaagctgcccattagaatagcacaagcattgcaattacgatttaaagag
cttattgcacataagaagttacaagagtggttgtggcgccagtggagatatggattcagt
caacacattgacaggtcgcatgttcgacgcattttagtgacaactttattttttattttt
tggccaattttcagcgttctctaccttctcctgtctggttttacattctttgaaccattt
gtacgaatactgaaaacaccatacgtcaaattcatcctacacgcatcgtctcgcgtctcg
tttcttttcatactcatactgagaggcttcgtgaaacaaccagcagtatttgttttgaat
atttcgaatgatactttagctgaaacagatactatacggcaagactacatagcttacaaa
tcacacgcctatacaattcctgggttgatatttctctggatagcaggtatgacttggcgg
gaactaacaagattgcgagatcaaggcgcgaagatgtacatggatgttggaagcagtctt
gtagatgtaccacaaatatttttgtactggatatatctgatattcgcatcgatagctcat
acacaggcaggtagagttgtaagtcaagcaggttggctcaagaaggtgaccagcgctatg
tctgtaacaatgatatgtgattcggagccgtcgacaagctccaactgtacatccatatat
gaagaatctcgttttgactggcattctcacgaacccatcctaatagctgaagccgcattt
gcagttgccaatgtctttaccttcgtccgtttactcgatattaccgtcctcatagcgggt
ttaggagccctacaagtcagctttaagaagatgtttcggcctattttcaagtttctggca
ctgttttcctttgtctggctgtcattttctctggggacgacgcaactttaccgatctttt
gaagacgcaatgttggaattatgcgaacataaccatcgtatagacgagactcacgactgt
ccagataacgagccacactttaccacattgtggatatctttgacgtcttatttctggatg
ctgtttggtcagggtggtttgaattacttttctttaccacataatttgcgttttacggag
gatataggatggttgatctatgcactttggcatattgctgtagtcatgttcttgatgaag
attcttatcggcttgacgagttctgtctatgccaagatagagcgaaatgctgatatggaa
tggaagtttgcccgtaccaagatggtcagcgaatacatgatggatacagccgtagtcccg
ccaccgttcaatatcgttccttcgacggcatcgatagtcagatgttgtaaaacaatttta
aatgcaattgatcagggacgtactgtgacggatgaagtcgaattagaaagaagacgtact
aaaaccatacggctagaagaacgacaacaaaagaaagcaataagactaacgcacaactat
aagatgatttctggaatagtgaggcgccgctacgcacgcagcgtaatgaaaagccaacac
aaaatagccccacctcgagaaaaaactcaacgatttaaagcacaacaacaagaaacagga
tctggaacgcccgattcgtctgaggacatacgccgtatacagaagacctgcgattctctg
gcctctgatttgaaggacttacaacaaactatagatacacttgtgaaaactctgcaagac
ccacgcacagccgcggatgaatctacctaa
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