Amphiura filiformis: 140153207
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Entry
140153207 CDS
T10871
Name
(RefSeq) guanine nucleotide exchange factor C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
afil Amphiura filiformis
Pathway
afil04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140153207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afil04131
]
140153207
Membrane trafficking [BR:
afil04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
140153207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
DUF2358
Motif
Other DBs
NCBI-GeneID:
140153207
NCBI-ProteinID:
XP_072031995
LinkDB
All DBs
Position
1
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AA seq
702 aa
AA seq
DB search
MSDTKEDKSVEELLPVGQFLPSELMNENPETETRTPHSPPVTSNGDGHPKTLSSQLEEID
PMNVNLTPTEADQQSSKTHQDGADDKSDSSTEYQDTINNGSNNTSGCVEEVPYNKDGGLD
SSQETANGLLEGENTTVLANESVAESPNEGDGTSDSAYQDTTSDCDNKDANTTLHANGSV
DEHMANTEMDRSDSSTQYQDTAESHEEVNETLHNKESVEETLNERDENLVTTPTSQYPMF
SSHTSPEKVSPVSLNFEFDRPRDTCIKIVLPNTHDCPVYALVLCSWDNILGPNAQYVWGT
EQKHGFTPDMLNYLSTHTLTSSDQPENTVDTKMLILKERGILVTSFLFSGYDGIEKTVFS
LSLIVPYVECQWYLPLHEFCVSRLSMMIGKLRVLQDKHKEEVGELAIKSFNEDVPKFIGV
LTLLKTSSPGPTIQLSDTVFAAGLDNTLDVQFTRLAIASHLQTCGCTIVIGNSVSDINMM
ISTLAMFLSPGERRGCIYLTEEEERLYEKDLYLQGFLKDHINLSECMREVMVSSYPSTLV
DMVTLEVRQMLPYNEHAYWRHEVLCHELQSLWLDSQEPMVYLPIVTFQNKCETETLVQNF
QREINLLHPRSGVREAYIEQFQRLLDRKAVGLIKYVEEETMRGSKTSRITIKKLKHDLDL
NPEGNFRIILARAEKLKPGIFTIVCGNPAQMKDPSLQELPMT
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccaaagaagacaagagtgtggaggaactgttgcctgttggccagtttcta
ccatcagagttaatgaatgaaaatcctgaaactgaaacaagaactccacattctccacca
gtaacttcaaatggagatgggcatccaaaaacactatcttcccaattggaagaaattgat
cctatgaatgtgaacttgactcccaccgaagctgaccaacagtcttccaaaactcatcaa
gatggggctgatgacaaatcagactcttccactgaatatcaagacactattaataatggt
agcaacaacaccagtgggtgtgtggaagaggtgccttataataaggatggtggattagac
tcttctcaagagactgcgaatggtttgcttgaaggtgaaaacactactgtgcttgcaaat
gaatctgtcgcagagtctcccaatgaaggagatggtacatcagactctgcttatcaagac
actactagtgattgtgataacaaagatgcaaacactactttgcatgcaaatggatccgtt
gatgaacacatggctaatactgaaatggacagatcagactcctctacgcaatatcaggac
actgctgaatctcatgaagaagtaaatgaaactctacataataaagaatctgttgaagag
actcttaatgaaagagatgaaaatttagtcaccacccccacttcacagtatcctatgttt
agctcacacacaagtcctgagaaggtatctccagtgtcattgaattttgaatttgacaga
cccagagacacttgcatcaaaattgttctacccaacacacatgactgtccagtatatgcc
cttgtgctgtgctcatgggataacatcctaggtccaaatgctcaatatgtctggggaacg
gaacaaaagcatggtttcaccccagatatgttaaattatctatccactcacaccctaaca
tcaagcgatcagccggagaatacagtggacacaaagatgttaattctgaaagaacgaggg
atcttagtaacatcgtttttgttcagtgggtacgacggaattgaaaagacagtgttttca
ttgtctttgatagtgccttatgtggaatgccaatggtatttaccattgcatgaattctgt
gtgtcaagactgagcatgatgattggaaagctgcgtgtattacaggataaacacaaagag
gaggttggggaacttgcaatcaagtccttcaatgaagatgtgcctaaattcataggtgtc
ctcactttacttaagacatcaagccctggaccaacaatacagttgagtgatacagtgttt
gctgccggactagacaacactttagatgtgcaattcactagattagctatagcttcccat
cttcagacatgtggttgtacaatagtgattggcaattctgtctctgatataaacatgatg
atcagtactctagccatgttcctgtctccaggggaaagaaggggctgtatatatttgaca
gaagaagaagaaagattatatgagaaagatctgtatctgcaaggctttcttaaggaccac
atcaacttgtctgaatgtatgcgtgaggtgatggtcagctcatatcccagtactcttgtt
gacatggtaacgcttgaagtccgtcagatgttgccttataatgagcatgcctactggcga
catgaggtactatgtcatgaattacaaagcctatggctggatagtcaggaacctatggtg
tatcttccaattgtgaccttccaaaacaaatgtgaaaccgagactttagtacaaaacttc
caaagagagatcaatcttctccatccacgtagcggagtacgtgaagcatacatcgagcaa
tttcagaggctactggataggaaagctgttggacttatcaaatatgtggaagaagaaaca
atgaggggcagtaaaaccagtcgtatcaccatcaagaaactcaaacatgacttggacctc
aatcctgagggtaacttccgcattattttggcaagagcagaaaaactgaaacctggcatc
tttactatagtatgtggcaacccagctcaaatgaaagacccatctttacaagaactacca
atgacctaa
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