KEGG   Amphiura filiformis: 140155306
Entry
140155306         CDS       T10871                                 
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
afil  Amphiura filiformis
Pathway
afil03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:afil00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    140155306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afil03000]
    140155306
   04121 Ubiquitin system [BR:afil04121]
    140155306
   03036 Chromosome and associated proteins [BR:afil03036]
    140155306
Enzymes [BR:afil01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     140155306
Transcription factors [BR:afil03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    140155306
Ubiquitin system [BR:afil04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     140155306
Chromosome and associated proteins [BR:afil03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    140155306
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     140155306
SSDB
Motif
Pfam: PHD_4 F-box-like F-box LRR_6 Cupin_8 JmjC zf-CXXC JHD
Other DBs
NCBI-GeneID: 140155306
NCBI-ProteinID: XP_072034191
LinkDB
Position
6:33229176..33277882
AA seq 1217 aa
MASETNSGRCLRTKARRHYNEGEHQDDEIEGRRMFTLEDKIDAEKYSDDLVKSMEGHELT
FKFFQEHGFETPMVFREPDGLGLRMPDKDFGVDDVKHFVGARRVVDCMDVTTQKAETMTM
AQFAKYFSETDRQRLLNVISLEFSHTKLDDLVHPPSVVKQIDWVDTVWPRHLKKTQREST
NVIADMKYPKVRKYCLMSVGGCYTDFHVDFGGTSVWYHLLHGEKIFWLIPPTQKNLDMYQ
AWVLSGKQGEIFLGDKVTECSMVHLLAGNTFMIPSGWIHAVYTPKDSLVFGGNILHSFAI
DRQIKVTAMEDSTHVPPKFRYPFFWEINWYCLERYVHTLMGKTYLKPHPTGRSHDDDDDD
DASQDQENILPSGSKIERKDSTDSERTIDVGIKQESVKDEEEEDVDVDDDRSSTYDDPDT
PKTDHSRSSTPTKSLYFSHGQNGHSTEHVEDSTSQDTKSDIAKDEGESSQGSKVKSCLCS
FEKKGLSEMVRALAGFPVNKRNVPDLITDADSLLQDAREMMKIHEGDDPLAALTGEPMLK
WPRTPGRRKDKMSRGGKVSLASRPPSKTKKASSSLRKRRTKCRKCDNCLRDDCRECNXCR
DMKNICSGKMKQSCKMKRCSNPQLPSNCECYICGSDDRSDLNNTLMECHQCNLVTHPECL
RSEGYLGEGVINDEMGNSWECPKCCAGESVEQDKKGGAGDGLNESLVKRSVLKRKQMSPE
PESDTEIDIKPAPKKRGRPPASRRANKYNYPHKNGRSLYDDDDDDDEIDDDDDEDELVDS
PDPKPLPKRGFRRNRGRFGFRRMGRAKMVSYHQQRIAKQKVQQAKYHSIRGARRKGRSLR
MRAKPRLNLKKRNSKDIVAAPEPSVPGQSLQEDQEGQSNADVIVSSPQPKLTPLSIPALE
PEVVLMEKAKPTVIPFYVVRPAPISPPPSTFMLEDETPHQITHDTWMKVFQYLPQKDVCR
CMRVCKIWNRWCCDPSLWRCISIARMIPIPATALRGLVLRQPRSLDLNWTNISKQHIMWL
LARLPGLRALYLQGSSWDAVSALCSSICPPLRLLDLHWVSGIKDSSLTALLSRITNHRPG
MVDDKCHLRFLTDLRLTGTDITDASMLTLRECAPLLAKLDLQHCRKITDEGVRFLATEKS
PIRLTLRELNIANNNNISDACILSLRRLTGLQRVAVHSCPEINKDSWTFYGNESGVEVIL
VRPPRPARTAPSYSSML
NT seq 3654 nt   +upstreamnt  +downstreamnt
atggctagcgagacaaatagcggccgatgcttgaggaccaaggcaagacgtcattataat
gaaggagaacaccaagatgacgaaatagaaggccggcgtatgtttacactagaggacaaa
attgatgcagaaaaatacagtgatgatctggtgaaatctatggaaggccatgagctgaca
tttaagttttttcaagagcatggttttgagactcctatggtttttcgagagccagatgga
ctaggattaagaatgccagataaagactttggagtcgatgatgtaaaacatttcgtaggt
gcaagaagagttgtggattgtatggatgtaaccacacagaaagccgagacaatgacaatg
gcacagtttgctaaatacttttctgaaacagatcgacagaggctacttaatgtgattagt
ttggaattcagccacacaaagctagatgatttagttcatccaccgtcagtggtgaagcag
attgactgggtggatacagtgtggccaaggcatttgaagaagacccagagagaaagcaca
aatgtcattgctgatatgaagtatcctaaagttcgaaagtactgtttaatgagtgttgga
ggctgctacacagattttcatgtggactttggtggaacatcagtatggtatcacttatta
catggtgaaaagatcttttggttgatccctccaacacaaaagaatcttgacatgtaccag
gcctgggttctatctgggaagcaaggtgaaatcttcctgggtgacaaagttactgagtgc
agtatggttcatctgttagcaggcaatacattcatgatacctagtggttggattcatgct
gtctatacacccaaagattccttagtgtttggtggcaatatactacatagttttgctata
gacagacagatcaaagtcacagccatggaagacagtacacatgttccacccaaattcaga
tacccatttttctgggagatcaactggtactgcttagaaagatatgtacacacattaatg
ggcaagacctacctcaaaccacaccctaccggaagaagtcatgacgacgatgatgacgat
gatgcttcacaggaccaggagaacatcctgccatctggtagcaagatagaaaggaaagac
agtactgattcagaaaggacaattgatgttggtatcaagcaggaaagtgtcaaggatgaa
gaggaggaggatgtggatgttgacgacgacaggtcaagtacatatgatgaccctgacacg
ccaaagactgaccacagtaggtcaagtacacccacaaaatcattgtatttttcacacggg
caaaacggacacagtactgagcatgtcgaggactcaacatcgcaagataccaaatcggac
attgctaaagatgaaggagaatcaagtcaagggtcaaaggttaaaagctgcttgtgtagt
tttgagaagaaaggactcagtgagatggtgagagctttagcgggctttccagtgaacaag
agaaatgtgcccgatttgattactgatgcagattcattactgcaggatgcaagagagatg
atgaagatccatgaaggcgatgatcctttagcagctctaacgggtgaaccaatgctgaaa
tggccaaggacaccaggaagaaggaaagacaaaatgtccagagggggcaaagtatcatta
gcttctagaccaccttcaaagacaaagaaagcatcaagcagcttaagaaaacgacggacg
aaatgtcgcaaatgtgataattgtctgcgggatgattgccgagaatgcaatntttgcaga
gatatgaagaatatatgctcagggaagatgaaacagagttgtaaaatgaagaggtgttcc
aatccacaacttccaagcaactgtgaatgttacatctgtgggagtgatgatagatcagac
ttaaacaacacattaatggaatgtcaccagtgcaacctggtgacacacccagaatgtttg
agaagtgaaggatatctaggcgaaggcgtcattaatgatgagatgggcaatagctgggaa
tgtccgaaatgttgtgcaggagaaagtgttgaacaggacaaaaaaggtggagcaggtgac
gggttgaatgaatctcttgttaaaagatcagtactgaagagaaaacagatgtctccagag
cctgaatccgacaccgagatagatatcaagccagcacctaaaaagaggggtcgtccacct
gcatccagacgtgctaataaatacaattaccctcacaagaatggaagaagtctttacgat
gatgacgacgacgacgatgaaattgatgatgatgacgatgaagatgagctggtcgactcc
cctgatccgaaacctttacctaaaagagggtttagaagaaatcgtggcagatttggcttc
agacgtatgggacgagcaaaaatggtttcttaccatcaacaacgtattgctaaacaaaag
gtgcaacaagcaaaataccactccatacgcggtgctcgacgtaaaggtagaagtctgaga
atgcgtgcaaaaccgagacttaatttgaagaaaagaaactccaaagatatagtggcagcg
ccagagccatcagtacctggtcagtcattgcaagaagatcaagaaggccaatctaatgcg
gatgttatagtcagtagtcctcaaccaaaactgaccccactatcaattccagctctggag
cctgaagttgtattgatggaaaaagctaaaccaactgtcatccctttctatgtggtacgt
ccagcgccgatctctcctcctccttccacatttatgcttgaagatgaaacaccacatcaa
ataacccatgacacatggatgaaggtttttcaatatcttccgcaaaaagatgtgtgtcgt
tgtatgagggtttgcaagatatggaatcgttggtgttgtgacccatcgttatggcgatgt
atcagtatagctcgtatgatccctataccagcaactgctcttcgtggattagtacttcgt
caacccaggtcacttgatttgaactggactaacatcagcaagcagcacataatgtggctt
ttagccagattacctggtttacgagctctttacctccaaggcagctcatgggatgccgta
tcagcattgtgttcatcaatatgccctcctcttcgtcttctggatctgcactgggtaagt
ggcatcaaagactcctctctgactgcactcctatcacgaatcacaaatcatcgacctggc
atggttgacgacaaatgtcatttacgcttcttgacagatttaagattgacgggaaccgac
atcaccgatgcttccatgttgactctcagagaatgtgcgccattgttggccaaacttgat
cttcagcattgcagaaagataactgacgaaggggttaggttcttggctactgagaagtcc
ccaatacgactcacattgagagaactcaacattgccaacaataataacatctcggatgca
tgtattctcagtttgagacgcttgactggacttcaacgggtagcggttcactcttgtcca
gaaatcaacaaagactcctggacattctatggcaatgaatctggtgtcgaggtgatcctt
gtcagacccccaagaccagcaaggactgcaccgtcatattcatccatgctttaa

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