Amphiura filiformis: 140164934
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Entry
140164934 CDS
T10871
Name
(RefSeq) short transient receptor potential channel 7-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
afil Amphiura filiformis
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afil04040
]
140164934
Ion channels [BR:
afil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140164934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank
Ank_5
VirB8
Motif
Other DBs
NCBI-GeneID:
140164934
NCBI-ProteinID:
XP_072044433
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All DBs
Position
11:49294971..49402381
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AA seq
1361 aa
AA seq
DB search
MTSASDEVQIGEEESLTTQEQLFKSAQDGNISVFMDLLNRKDELEIDLECENANGDTVLK
LAIKEGYSVLVQQLLKHDIQVSDALLKSVDVGFVATVKVICEYAQNLPTHESRIAILECH
GEDQEFHPDVTPIILAAQRNDFTLVQILLNAGASIPENFKDISTRASDSLQKSVGLLEIY
KGLASEAYVSQKYPDPVDRAFVLSDTLQKLSKSEVAFKSSYLELAETMNRLGTDIISSAR
STEEILTVLSHHDHDADDTENVNMGPFPKLSRAIQFDQRKFIAQSNCQQAVKSKFYGVLS
SIRDRSSSYRLFYFLSMIVTFPFLVMCYLYIPSKRIKTRMQCPYVKFTMHLASDVFFITF
ITADVLVGVNISSTLTLTRPTRALILLWTVGIGWQVISALRKDRFRSTHVRNTILVVTLL
TGAALDLTSYYFYLNPDTAIILQSGSTTNESSAQTSNDIYIVSNASNEALYRIPKSTDVQ
YFYPNGSSANITLLQHVPIMPSYRRAQVSRGSSSHDGQDSRTDEQIFNEDVSAFLSLNWW
HPRLFATAMFSIATVVAFLRMLPYVAASNVVGALQISLWSMISKTSHFFLVLGVVGFSIA
VGLTYIYAYYHATEYQICISAQGSGDCSTRPLSNLFWVVVYLYWSLFGLENPNRLELSLQ
AKVLERTGYLLYALFFVLVGLVLLNALIAVMTEVYNEIEINADIEWKFASTSMYMSFMQD
GDVVPPPFNLLPSLRDFVRFLKFAQKELRPRRKRVRNERHERIKYEGPKMRKRKGIKMSQ
YQRVIARLVERYVGSKTAEEMSVESDVNITDIRELRNDMLTLKFDIFQRLQDSVEDIHQA
IGKGHKTRVKSVGANSIFKRADVLHSTVNRHLKYVLAFKKELEATIAAIPDPPETTEKEV
QTNPCGLTFESPSTYGEADISDVDTPKVVVSNGSQTSSQWMTTKRTQTMPPGLHEIAMQT
TREYLVDGRCQTIPPPETSKIDVSTQISRYVYPIGSAIVNGPHIHHKSKYKMLSCLIPGS
AVQMDSYQTSSETTVQNGTSQTPSSPTVCESSVQTTQGDYLVDMGQQTSHDDLLPGHDDK
LTQTMVDVSEKTSQTLLHQSQEIAVQAYATEFLVDCTSQTSLQTKGDATSQTSVVEINEE
TTQICHEDLVNGSSQTLPPALVEGSSQTLKAVHSDEEVQVMPDVNDIKIQTSREYLADCM
SQTSLEVKEESLQTEADSITDTTTQTSIVEINEESTQTSQEKLIDGSCQTPTLPAMTEGS
SQTLKEIHSDEEVQAMPDVNDIKIQTSRGEYLNDKNSQTNSPPSMSEVPSQTTNEFLIDG
IAQTIAIDTTEVSTQTMQSGNDVLGWIQEKIQFFETVGAQG
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagcatcggatgaagtacaaatcggcgaggaggaatcacttacgacccaagag
cagttgtttaaatcagcacaagacgggaatatcagtgtatttatggacctactgaatcga
aaagatgaacttgaaattgacttggaatgtgaaaacgctaacggagataccgtgctgaaa
cttgccatcaaagaaggatactcagtattagttcaacagcttttgaaacatgacatccaa
gtctccgatgctttgctgaaatccgtcgatgttggttttgtggcaactgtaaaggtcatt
tgtgaatatgctcaaaacttaccgacgcacgaaagtcgtattgctatattggaatgtcac
ggtgaggaccaagaatttcatccggatgttactcccatcatactggcggcacagcgtaat
gatttcacattggtacagattcttctgaatgctggtgcaagtatcccggaaaactttaaa
gatatatcaacgagggcaagtgacagtcttcagaaatccgtgggtttacttgaaatctat
aagggattggctagtgaagcttatgtatctcaaaaataccccgatcctgtggatagggca
tttgtattaagtgacacccttcagaagctcagtaagagtgaagtcgcatttaaatcgagt
tacctggaacttgctgaaacaatgaatcggctaggtacggatatcatctccagcgccagg
agtacagaagagatcttgaccgttttatctcatcatgatcatgatgcagacgataccgag
aatgtgaatatgggaccgtttccaaagttgtctagagcgatacaatttgatcaaagaaaa
tttattgctcaatccaactgccaacaagccgtaaagtctaagttttacggagtcctctct
tcaatccgagatcgaagttcttcatataggttattttactttttgagtatgattgtgacg
tttccattcctagtaatgtgctatttgtacataccatcgaaacggattaagacaagaatg
cagtgtccatacgtcaaatttacgatgcatttggcttccgacgtattctttattaccttc
atcacggcagacgttttggtaggagtaaatatatcatcaacattaacgctgactcgtcca
acaagagctcttatacttctttggacagtgggaattggctggcaggtcatcagtgcacta
aggaaagaccgattccgttcaacccacgtacgaaataccatcttggttgttacgttgctg
acaggagctgcattggatttgacgagttactacttctatttgaatccggatacagctatt
attttgcaatcgggtagcactacaaatgagtcatcggcgcaaacatcaaatgacatttac
attgtatcaaacgcctcgaacgaagccctctatcgaattcctaaatcgactgatgttcag
tatttttatcccaacggttcatcagcaaacatcactctcttgcaacacgtacccattatg
ccttcttatcgacgagcacaagtttcaagaggttcatcgtcacatgacggacaagattcc
aggacggatgaacaaatttttaacgaggatgtttcagcttttctgtcgctcaactggtgg
cacccacgtctcttcgcaaccgccatgttttctatcgccactgtagttgcatttctacgc
atgctcccgtacgttgccgcgagtaacgtcgttggggcattacagatctccttgtggtcc
atgatatcaaagacatcacatttctttttagttctaggtgtcgtcggtttctcaattgct
gttggattgacttacatctatgcttattatcatgcaacagagtaccaaatttgtatttct
gcccaaggaagcggggattgttcgacaaggccattatcaaatttattctgggttgtcgtt
tatctctactggtcactctttggtttagaaaacccaaatcgtctggaattaagcttacaa
gccaaagtgcttgagagaactggctaccttctctatgctctgttcttcgtgttggttggt
ctagtcctactcaacgcccttattgcagtcatgacggaggtttacaatgaaatagagatt
aatgccgatatagaatggaagttcgcatccacgtcaatgtatatgagctttatgcaagac
ggtgacgtggttccgccaccgtttaatttgttgccatcattgagagatttcgtaaggttt
ttgaagttcgcccaaaaagagctccggccacgccgaaaacgagtccgaaatgaaagacac
gaaaggatcaaatatgaaggtcctaagatgaggaaacggaaagggattaaaatgtcacaa
tatcagcgagttatagcgcgtctagtagaacgatatgtcggatccaaaacagcagaagaa
atgagtgtggaatctgacgttaacatcactgacatcagggagctgaggaatgacatgctt
acgctgaagtttgacatcttccagaggctacaggacagtgtagaagacatccaccaagca
attggcaaaggacataaaacaagagtgaaatcagtaggcgcaaattctatattcaaacgt
gccgacgttctccattctacagtcaaccgacacttgaagtacgttctagcttttaagaaa
gagttagaagcaacgatagcggcaattcctgatccaccagaaacgacagagaaagaggta
cagacaaatccttgcggattgaccttcgaatctccgtcaacttatggtgaagctgacatt
tctgatgtcgacacaccaaaagttgttgtcagcaatggatcacagacatcgtcgcaatgg
atgactaccaaacgaactcaaacaatgcctcctgggctgcatgagatagcaatgcaaacc
acaagagaatatttagtagatggacggtgccaaacaattccaccacctgaaacgtcaaag
attgatgtctcgacgcagatatctcgttatgtttatcctattgggagtgctatcgtaaat
ggacctcatatacatcataagagcaaatataagatgttgtcctgccttattcctggatct
gcagtgcaaatggattcataccagacgtcttcagaaacgaccgttcaaaatggtacttca
caaacaccatcttctccgaccgtttgtgaatcttctgttcaaacaacacagggggattac
ttggtagatatgggacaacaaacatcacatgatgatttacttccgggtcatgatgataag
ttgactcaaacgatggttgatgtcagtgaaaagacttcacagactctacttcatcagtca
caagaaatagctgtccaggcatacgcaactgaatttcttgtggattgcacgtcccaaaca
tctctgcagacaaagggagacgccacatcgcagacctctgttgtagagataaacgaagaa
acaacacaaatttgtcacgaagacctagtcaacggaagctcgcagacactgccgcctgct
cttgtagaaggatcttcacaaacattgaaggcggtccattcggatgaagaggtgcaggtc
atgcctgatgttaatgacataaagatacagacaagtcgtgaatatcttgcggattgcatg
tcccaaacatcactcgaagtgaaagaagaatctttgcagacagaggcagattcaatcaca
gacaccactactcagacctctattgtagaaataaacgaagaatcaacacaaaccagtcaa
gaaaagcttatcgacggaagctgtcagacaccgacactgcctgctatgacagaaggatct
tcacaaacattgaaggagatccattcggatgaagaggtgcaggccatgcctgatgttaat
gacataaagatacagaccagtcgtggtgaatacctcaacgataagaattcacagacaaat
tcaccgccttcaatgagcgaagtgccttcacagacaacaaatgagttcctcatagatgga
atcgcacagacaatagccatcgatacaaccgaggtttcaacacaaaccatgcaaagcgga
aatgacgtattggggtggatacaggagaaaatccagttttttgaaaccgtcggggcccaa
ggttga
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