Amphiura filiformis: 140165102
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Entry
140165102 CDS
T10871
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
afil Amphiura filiformis
Pathway
afil00514
Other types of O-glycan biosynthesis
afil04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
afil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
140165102
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
140165102
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
afil01003
]
140165102
Enzymes [BR:
afil01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
140165102
Glycosyltransferases [BR:
afil01003
]
Glycan extension
O-Glycan
140165102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
LLG1
Motif
Other DBs
NCBI-GeneID:
140165102
NCBI-ProteinID:
XP_072044630
LinkDB
All DBs
Position
11:61103459..61231373
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AA seq
482 aa
AA seq
DB search
MRWRVRRTLTSILILVFGAITTFVLHFNVSEKSEKFDSGDFQQLHRRAAGVAVVSVRDGS
SRVNVHDVGDQRNGSFGSLLHQSKKEQSRGGGIREMAWANDVPSLSDDDSQLPPPLPQQQ
LNTSETEFQLKLIEKELNQFALQLQQTQENLLREQSQRYGGRQQQLKPVLQKSSPPNLTI
VVKEAPKYIPVAADTAAKLQQPVPPQSIPETNFRKTELNDVFIAVKTTGKYHKSRLDILL
DTWVTQAKEQTYFFTDIFDEEYRIRTNYHLINTNCSGQHSRQALCCKTAVIYDTFLKSGK
RWFCGVDDDNYLNVKQLLILLQDYKHEQDVYLGRASLSHPIEAMDRDNAMQRVTFWFATG
GAGYCISRSLALKMSPYASGGTFKSMCNRIRLPDDVSIGFIIETLLKQPLTRINKFNSHL
QSLRTIKPDQLSKQITLSYGIDEKRINVVQIPNGAYSETQDPTRFKSLHCLLNPTLGKCP
HR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggagggtaagacgtaccctgacatctatcctcatcctggtgtttggagcaatc
accacttttgtactacacttcaatgttagcgaaaagtctgaaaagtttgatagcggggat
ttccagcaactacaccggagagctgccggggtcgccgtggtcagcgttcgcgatggtagt
agtagggtgaatgttcatgatgttggagatcaacgaaatggcagttttggaagtttactg
catcaatccaagaaagaacagtctaggggaggtggtatacgtgaaatggcatgggcaaat
gatgtccccagcctttcagatgatgattcgcaattgccaccaccactaccccagcaacaa
ctaaacacatctgaaactgaatttcaactcaagcttatcgaaaaagaactgaatcaattt
gctttacaacttcagcagacacaagagaatttgttacgagaacagtctcaaagatatggt
ggtagacagcaacaactgaaaccagtattgcaaaaatcgtcaccaccaaatttaactatt
gttgtaaaagaagcaccaaaatacattccagttgcagcggatactgcagctaagttacaa
caaccagtcccccctcagtctattccagaaactaattttagaaaaactgaattgaatgat
gtatttattgctgttaaaacaacaggaaaatatcacaaatcaagattggatattttatta
gatacttgggtgactcaagcaaaagaacagacatacttctttacagatatatttgatgag
gagtatagaataagaacaaattatcaccttataaatacaaattgttctggtcaacattcc
aggcaagcattatgttgtaaaacagctgtaatttatgacacatttttaaaatcagggaaa
aggtggttttgtggagtagatgatgataattatttgaatgttaaacagctactaatctta
ttacaagactacaagcatgagcaagatgtctacttaggtcgtgctagtctcagccatcca
atagaggccatggacagggacaacgcaatgcaacgagtaacattttggtttgctactggt
ggtgcaggttattgtatcagcaggtctctagctctaaagatgtcaccatatgctagtggt
ggaacatttaaaagcatgtgcaataggattcgtctccctgacgacgtatccataggattt
attatagaaacattattaaaacaaccattgactagaataaacaagtttaattctcatctg
cagtcgctaagaactatcaaacctgaccaactatcaaagcagataaccctaagctatggc
atagatgagaagagaatcaatgtagtgcagataccaaatggagcatacagtgaaactcaa
gaccctaccagattcaagtcgttacactgtttactcaaccctacactcggaaaatgtccc
cacagatga
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