Acidaminococcus fermentans: Acfer_0104
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Entry
Acfer_0104 CDS
T01151
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afn
Acidaminococcus fermentans
Pathway
afn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Acfer_0104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afn03400
]
Acfer_0104
Enzymes [BR:
afn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Acfer_0104
DNA repair and recombination proteins [BR:
afn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Acfer_0104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADB46513
UniProt:
D2RN87
LinkDB
All DBs
Position
complement(125520..126167)
Genome browser
AA seq
215 aa
AA seq
DB search
MEPAKTFDELKKQLEDCAACPLRKDCQAPVGWFGNLESPLMIVGEGPGGVEDDYGCPLIG
PSGQLLDKALWSVRITRDRIYTTNVIKCRPRGNRTPTVEEGSFCARLWLEQEIRLLRPKV
ILALGSVALRYFKGPEARITRERGQWFTTGEGIPCLATFHPSYLLRLTGQAQIAAKWDVF
HDLEAVKAKVEEQCPGYCWNSGAPVHLFALFRKRS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgcaaaaacctttgatgaactgaagaaacagctggaggattgtgccgcctgc
ccgctccgcaaggactgccaggccccggtgggctggttcggcaacctggagagccccctg
atgatcgtgggcgaaggccccggcggcgtggaggatgactacggctgtcccctcatcggc
cccagcggccagctgctggacaaagccctctggtccgtccggattacccgggaccggatc
tacaccaccaacgtgatcaaatgccggcccagagggaaccggacccctacggtggaagaa
ggatccttctgtgcccggctgtggctggaacaggaaatccggctgctccggcccaaagtg
atcctggccctgggcagtgtggccctccggtatttcaaagggccggaagcccggatcacc
cgggagcggggccagtggttcaccaccggagaagggatcccctgcctggccaccttccat
ccctcctatctcctccgtctcaccggccaggcccagatcgccgccaaatgggacgtgttc
cacgatctggaagccgtaaaggccaaagtggaggaacagtgtcccgggtactgctggaac
agcggtgctccggtgcatctgtttgcgttgttcaggaaaagaagctga
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