Acidaminococcus fermentans: Acfer_0458
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Entry
Acfer_0458 CDS
T01151
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
afn
Acidaminococcus fermentans
Pathway
afn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Acfer_0458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afn03400
]
Acfer_0458
Enzymes [BR:
afn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acfer_0458
DNA repair and recombination proteins [BR:
afn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Acfer_0458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
RecG_dom3_C
tRNA_anti-codon
Cas3-like_C_2
DEXQc_Suv3
TIP49
SecA_DEAD
AAA_16
AAA_30
ASD1_dom
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADB46861
UniProt:
D2RIF9
LinkDB
All DBs
Position
539385..541448
Genome browser
AA seq
687 aa
AA seq
DB search
MWWQEPVTRLKGIGPKKALEFENINVVTIGDLLNHFPRQGCYLDYSHIRTIGELTTGGEM
QLFRGTIVRMNNRRSARNLKYATITIGDGTGFAEIVLFGAQTYMTRVYHTGDEVLVIGKV
MPGRTAKSVTGASLSHVKEDGAEAPGILPTYALTGSLTQNQVRGAVRQALALARKELPEC
LPEKILRAKQFLPRLEALENIHFPKSPELLEKARQRLIFEELFFLQCGLLHHRVEIKKDS
QGIKMARCGTLVRKVLDNLGFSLTDSQKKAWQEIDDDMQSPEPMNRLVQGDVGSGKTALA
LLALAKAVENGYQGCLMAPTEILAEQHYQEMQKVLEPAGIRTALLTGGLSAKTRRQVLEG
LADGSIQAVVGTYALIQDKVVFHSLALAITDEQHRFGVAQRAKLQAKSQYAPHVLVMTAT
PIPRTLALTVYGDLDVSLMKGLPPGRKPVRTLCYTEEKRPAVYQGMVHQIREGHQAYVVC
PLIEESEGVDAKAAEELYEELTSTYLRGIPCGLLHGRLKPEEKDAVMESFARNETKVLIT
TTVVEVGVNVPNATLMVIEGADRFGLAQMHQLRGRVGRGSAQSYCVLLTASTNPVTLERL
QIMRSCSDGFLLAEKDLELRGAGQFFGLRQHGLSDLYIADILRDTDTLVEARKAAQWAMG
NPSIAKEVIRAAAVTQFDGRFERIFNA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggcaggaaccagtaaccagactcaaaggcatcgggcccaaaaaggccctggaa
ttcgaaaatatcaatgttgtaaccatcggcgacctgctgaaccattttccccggcaggga
tgctatctggattattcccatatccggaccatcggtgagctgaccaccggaggggaaatg
cagctgttccgggggaccatcgtacggatgaacaaccggcggagtgcccggaacctgaag
tacgccaccatcaccatcggggacggcaccgggtttgcggaaatcgtcctgttcggggcc
cagacctacatgacccgggtctatcacaccggggatgaggtgctggtcatcggcaaggtg
atgccgggacgcacggccaaaagcgttacgggggcgtccctgtcccatgtaaaagaggac
ggagcggaagcaccggggattcttcccacctatgccctcaccggcagcctgacccagaac
caggtccggggagcagtgcgccaggccctggccctggcccggaaggaactgccggaatgc
ctgccggaaaaaatcctccgggccaaacagttcctgccccggctggaagccctggagaac
atccactttcccaaaagtccggaacttctggaaaaggcccggcagcggctgattttcgag
gaactgttctttctccagtgcggcctgctccaccaccgggtggagatcaagaaggacagc
cagggcattaaaatggcccggtgcgggacgctggtccggaaggttctggacaacctgggc
ttttccctgacggacagccagaaaaaagcctggcaggaaatcgacgatgatatgcagagt
ccggagcccatgaatcggctggtccagggggatgtgggctccgggaaaacggccctggct
ctcctggccctggccaaggcggtggagaacggctatcagggatgcctgatggcgcctacg
gaaatcctggcagagcagcactaccaggagatgcagaaggtgctggaaccggccggcatc
cgtacggcccttttgaccgggggactttctgccaaaacccgccggcaggtattggaaggg
ctggcggatggttccatccaggcggtagtggggacctatgctctgatccaggacaaggtg
gtgttccactccctggccctggccattaccgacgaacagcaccggttcggggtggctcag
cgggccaaactccaggccaagagccagtacgcgccccatgtgctggtcatgaccgccacg
cccattccccgtaccctggccctcacggtgtacggagacctggatgtgtccctgatgaag
gggctgcccccgggacggaaaccggtccggaccctgtgctatacggaggagaaacggccg
gcggtgtatcagggaatggtccatcagatccgggagggccatcaggcctatgtggtatgc
ccgctgatcgaggaaagcgaaggggtggatgccaaggcggcggaggaactctatgaggaa
ctgacctccacctatctccgggggattccctgtggcctgctccacggacggttgaaaccg
gaagaaaaggatgcggtgatggaaagcttcgcccggaacgagaccaaggtgctgatcacc
accaccgtggtggaagtgggggtgaacgtgcccaacgccaccctgatggtcatcgagggg
gcggaccggttcggcctggcccagatgcaccagctccggggccgggtgggccggggcagc
gcccagtcctactgtgtgctgctgacggcctccaccaatccggtgaccctggaacggctc
cagatcatgcgcagctgcagtgacggatttctgctggcggaaaaggacctggagctccgg
ggggccggccagttcttcgggctgcggcagcacgggctcagcgacctgtacattgcggac
atcctccgggatacggataccctggtggaagcccggaaagcggcccagtgggccatgggg
aatccgtcaatcgccaaagaagtgatccgggccgcagccgtcacccagttcgacggccgg
ttcgaaaggatattcaatgcgtga
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