Acidaminococcus fermentans: Acfer_0614
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Entry
Acfer_0614 CDS
T01151
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afn
Acidaminococcus fermentans
Pathway
afn03420
Nucleotide excision repair
afn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Acfer_0614
03430 Mismatch repair
Acfer_0614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afn03400
]
Acfer_0614
Enzymes [BR:
afn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acfer_0614
DNA repair and recombination proteins [BR:
afn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Acfer_0614
MMR (mismatch excision repair)
Other MMR factors
Acfer_0614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_14
AAA_11
PriA_C
DEAD
ResIII
Capsid_N
Motif
Other DBs
NCBI-ProteinID:
ADB47008
UniProt:
D2RIV6
LinkDB
All DBs
Position
716703..718955
Genome browser
AA seq
750 aa
AA seq
DB search
MRDLLASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLLEKGVKPWNILAITFT
NKAAKEMRQRVDALVGPSAKDVWLYTFHGFCNQLLRRDINALPGYTTSFSIYDPSDCKNV
LKEALKKLNLDEKFYPLPGLLATISNAKNAQVDAAAFARQAEDYHAKKVAEIYAEYQKHL
VQSNAVDFDDLLLLTVKLLQTVPEVREKYQNKFHYVLIDEYQDTNHVQYLLAKLLSAPEN
NLCAVGDIDQSIYGWRGADISNILDFEKDYPQARIFKLEQNYRSTQVILDAANEVIKHNA
ARRPKNLWTENGNGQPIAYYQARDDREEAEFVVGQIRKLQREGTKLGDMAILYRTNAQSR
MFEENLINNGVPYVMVGSLKFYDRKEVKDTLSYLRFLSNERDIQGLERIINEPKRGIGAA
TVAKVRTLLEDSGMTLPEVLQTVQARELLGRAFPKIQAFSDMIQELARVKDTLPVKDLME
QVLEKSGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDPGEENNKTLEDFLNHVALVA
DIDDAKLTQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEERRLCYVG
ITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLIENVAVRRSTYGGYGGQRGHQG
STGTHASLRTIARSRGGSILDTPAPRSRFVPEGGAVPEFRPGDKCRHKKFGTGTIIEARP
DGSEGQLVTVAFPGSGIKQLATKYKILEKI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgagagaccttttagcttcattgaatgaacagcaggctgaggcagtccgtcagattgcc
gggcctattttaattttggccggggccggcagcggcaagaccaaggccctgaccaccaaa
atcgcctatctcctggaaaaaggggtcaagccctggaacatcctggccatcaccttcacc
aacaaggcggccaaggaaatgcgccagcgggtggatgccctggtggggccttccgcaaag
gatgtgtggctgtacaccttccacggattctgcaaccagctgctccgccgggatatcaat
gcactgcccggatacaccacttctttttccatctatgatccctccgactgcaagaatgtg
ctgaaggaagccctgaaaaaactgaacctggacgaaaaattctatcctcttccggggctc
ctggccaccatttccaacgccaagaacgctcaggtggacgcggcggcctttgcccggcag
gcggaggactatcacgccaaaaaggtggcggagatctatgccgaatatcagaagcacctg
gtccagagcaatgcggtggatttcgatgacctgctgctgctgacggtgaaactgctccag
accgtaccggaagtccgggaaaagtaccagaacaagttccactacgtgctcatcgatgaa
tatcaggacaccaaccatgtccagtacctgctggccaagctgctctccgcaccggaaaac
aacctgtgcgccgtgggggatatcgaccagagcatctacggctggcggggggcggacatc
agcaacatcctggatttcgaaaaggactaccctcaggcccggatcttcaaactggaacag
aactaccggtccacccaggtgatcctggatgcggccaatgaggtgatcaaacacaacgcc
gcccgccgtcccaagaacctgtggacggaaaacggcaacggccagcccattgcctattac
caggcccgggacgaccgggaagaggcggaattcgtggtgggccagatccggaagctccag
cgggaaggaaccaaactgggggatatggccatcctgtaccggaccaatgcccagagtcgg
atgttcgaagaaaacctgatcaacaacggggtcccctatgtaatggtgggaagcctgaag
ttctacgaccggaaggaagtgaaggacaccctgagctaccttcgtttcctgtccaacgaa
cgggatatccaggggctggaacggatcatcaatgaacccaagcggggcatcggggcagcc
acggtggccaaggtccggaccctgctggaagacagcggcatgaccctgccggaagtgctc
cagaccgtccaggcccgggaactgctgggccgggccttccccaagatccaggccttcagt
gacatgatccaggaactggcccgggtgaaggataccctgccggtgaaggatctgatggag
caggtattggaaaaatccggttacctggaagccctccgtctggaaggatccgaccagagc
aagagccggctggacaacctgaacgaattcctccggattgccgacgaattcgccaaggat
cccggggaggaaaacaacaagaccctggaagacttcctgaaccatgtggccctggtggcg
gacatcgatgacgccaagctgacccaggattccgtcaccctgatgaccctccattccgcc
aagggtctggaatttccggtggtgttcatcgggggcatggaggacggtctgttccccagc
cagcggagcctggaagacgaggacaaactggaagaagaacggcggctgtgctatgtgggg
atcacccgggccaagaagcggctgtatctcaccaactgccggagccggatggtgtacggc
catgtggtcatgtacccgccttcccggttcctggaggagattccccggaacctgatcgaa
aacgtggcagtgcgccggagcacctatgggggatacgggggccagcggggccatcagggc
agcaccggtacccatgccagcctgcggaccattgcccggagtcggggcggcagcatcctg
gatacgccggctccccggagccggttcgtgccggaaggaggagcggtgccggaattccgt
cccggggacaaatgccggcacaagaagttcggtacggggaccatcatcgaggcccgtccc
gacggcagcgaaggacagctggtgaccgtggcctttccgggcagcggtatcaaacagctg
gccaccaagtacaagatcctggagaagatctga
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integrated database retrieval system
