KEGG   Acidaminococcus fermentans: Acfer_0797
Entry
Acfer_0797        CDS       T01151                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
afn  Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:afn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afn03400]
    Acfer_0797
Enzymes [BR:afn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Acfer_0797
    5.6.2.6  RNA 3'-5' helicase
     Acfer_0797
DNA repair and recombination proteins [BR:afn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Acfer_0797
SSDB
Motif
Pfam: DEAD Helicase_C Cas3-like_C_2 ResIII WH_Lhr DUF2087
Other DBs
NCBI-ProteinID: ADB47185
UniProt: D2RJD3
LinkDB
Position
924474..926747
AA seq 757 aa
MNIFDRYAPFVQDFIYSQGWSELRPIQVAAGDVLLNTDENLLLTASTASGKTEAAFFPIL
SLFAQAPPKSVGCIYIGPLKALINDQFLRLQPLCEEGGIPVWHWHGDVSQSHKAKLLKHP
SGILQITPESLEALLLHKHMAIPRLFGDLRFVVIDEVHSLLRGDRGGQTLCLIQRLSRLA
GVNPRRIGLSATLGDPEKVGEFLSMGTGRKTLIPQVKAPGTRWRLSMEHFYVKDAQAGED
RTDIAALPALDQKTDQAPAQADPGLGYIFEHTRGKKCLVFVNSREECEGVTTSLRQYCEL
NHEPDRFLIHHGNLSASYRETAEELMKDESRSLTTVTTSTLELGIDIGRLERAFQIDAPW
TVSSFLQRMGRTGRRDLPPEMWFVIREDEPEIRAMLPATIPWKLLQGIALIQLYLEERWV
EPPRLDRLPYSLLYHQTMSVLASNGEMSPAALADRVLRLSYFHRITQEDYKVLLRYLIAE
DHIQRTEQGGLIVGLAGERVIRSFKFYGVFQENEEFTVRCDSQELGTVVAPPPPGEKIAL
AGHVWRVLEVDRKRHVIYCELVKGKVPAYFGECPGDIHTKVLERMRRVLREDRNYPYLMK
NAVARLQQARFTAKASGAAEKPLIRLGGKMWCLLPWLGSYGFLALERFLNLKCAQKLGLK
KLDPFRPFFMQFTMEANEESFFQVVEEEIQKEIDPLELVYPHEVPLFDKYDEYLPEELVK
KGFALGVLNLEDVRKRVREWTENRKKAVGAPETREPR
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgaatatctttgaccggtatgcaccttttgtccaggatttcatctacagccagggatgg
tcggaactccggcccatccaggtggcggcaggggatgtgctgctgaatacagatgagaat
ctgctgctcaccgcttccacggcttccggcaagacggaagcggccttcttccccatcctg
tccctgtttgcccaggcccccccaaaaagtgtgggatgtatttacatcggacccctgaag
gccctgatcaacgaccagttcctgcggctccagcctttgtgcgaagaagggggcatcccg
gtatggcactggcatggggatgtatcccagtcccacaaggccaaactgctgaagcatccc
tccggaatcctgcagatcaccccggaatccctggaagccctgctgctccacaagcacatg
gctattccccggctgttcggagatctgcggttcgtggtcatcgatgaggtccattccctg
ctccggggggaccgggggggacagaccctgtgcctgatccagcggctgtcccggctggcc
ggggtgaatccccggcggatcggcctgtcggccaccctgggggatccggaaaaagtggga
gaattcctcagcatgggaacgggacggaagaccctgatcccccaggtgaaggctccgggg
acccgatggcggctgtccatggaacatttttacgtgaaggacgcccaggccggggaagac
cggacggatatcgccgccctgccggctctggaccagaagacggaccaggctccggcccag
gcggatccggggctggggtacatttttgaacatacccggggcaagaaatgcctggtgttc
gtgaactcccgggaggagtgcgaaggggtcaccaccagtctccggcagtactgcgaactg
aaccatgaaccggaccggttcctgatccaccatgggaatctgtccgcttcctaccgggaa
acggcggaagaactgatgaaggacgaaagccggagcctgaccaccgtgaccacttccacc
ctggaactgggcatcgatatcggccggctggaacgggccttccagatcgatgctccctgg
actgtttcctcattcctccagcggatggggcggacgggacggcgggatctgccccctgaa
atgtggttcgtgatccgggaagatgaaccggagatccgggccatgctgccggccaccatt
ccctggaaactgctccaggggattgccctgatccagctgtatctggaggaaagatgggtg
gaaccgccccggctggacaggctgccctacagcctcctgtaccaccagaccatgagtgtg
ctggccagcaacggggaaatgtccccggcggccctggcggaccgggtgctgcggctcagc
tatttccaccggattacccaggaggactacaaggtgctgctccggtatctcattgccgaa
gaccatatccaaagaacggagcaggggggactgattgtgggcctggccggggagcgggtg
atccgttccttcaaattctatggggtgttccaggaaaacgaggaattcaccgtccgctgc
gattcccaggaactgggcaccgtggtggcgcctccccctccgggcgagaaaatcgccctg
gccggccatgtgtggcgggtgctggaggtggaccggaagcgccatgtgatctactgcgaa
ctggtgaagggaaaagtgcccgcctatttcggggaatgtcccggggatatccacaccaag
gtgctggaacggatgcgccgggtgctccgggaagaccggaactatccctatctgatgaag
aatgcggtggcccggctccagcaggcccgattcactgcaaaggcatcaggagcggcggaa
aagcccctgatccggctggggggcaaaatgtggtgcctgctgccctggctggggagttac
ggattcctggccctggaacggttcctgaacctgaaatgcgcccagaaactgggcctgaag
aaactggatcccttccggcccttctttatgcagtttaccatggaagcgaatgaggagtcc
tttttccaggtggtggaggaggaaatccagaaggaaatcgatccgctggagttggtttat
ccccacgaagtgccgctttttgacaaatatgacgagtacctgccggaagaactggtgaaa
aaagggttcgccctgggggtactgaacctggaggatgtgcggaaacgggtccgggaatgg
acggagaatcggaaaaaggctgtgggggcaccggaaacccgggagccccgctga

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