Acidaminococcus fermentans: Acfer_0893
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Entry
Acfer_0893 CDS
T01151
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afn03400
]
Acfer_0893
DNA repair and recombination proteins [BR:
afn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Acfer_0893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
AAA_22
Rad51
ChlI
Lon_C
GvpD_P-loop
AAA
RecA_N
AAA_16
A2L_zn_ribbon
AAA_24
nSTAND3
DUF7129
AAA_30
AAA_19
TniB
AAA_14
IstB_IS21
nSTAND_NTPase5
NB-ARC
KdpD
CbiA
NTPase_1
CobU
KTI12
AAA_18
AAA_5
zf-RING_10
DZR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ADB47278
UniProt:
D2RJM6
LinkDB
All DBs
Position
1027442..1028815
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AA seq
457 aa
AA seq
DB search
MAKTQTHYVCQNCGYSTPKWLGKCPECGRWDTLVEETAAPAPSRQRPSYLAVTEAPTPKT
LKQVDRVKVQRMTTGIHEFDRVLGGGIVPGSLILLGGAPGIGKSTITLDVSMKAAARGAR
VLYVSGEESEAQTAMRAERLGQATDALQIMTATELGTILVQARQVKPRLLVIDSIQTMYN
QELESAAGSVGQVRECTAKLLTFAKETGIAIIIIGHVTKEGNIAGPRLLEHMVDVVLQFE
GDRSYTYRVLRALKNRFGSTSECGIFSMEEEGLREVANPSGLFLEAREEAVSGSVITAAM
EGNRPILTEIQALVSHTPFGLPRRTVVGVDFNRVNMLLAVLEKRCGMNFGDQDAYVCAVG
GMKVKEPAADLAILGALVSSYRNRPVPMGVLAMGEVGLTGELRRVGLTDRRIKEAAQLGF
KRFIVPKGSFPQGKEPKGVTVIQARTVEEAIAGMYRE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaaacacagacccattatgtatgtcagaactgcgggtattccactcccaaatgg
ctgggcaagtgcccggaatgcggccggtgggataccctggtggaagaaacggcggcgccg
gctcccagccggcagcggccgtcttatcttgcggtgacggaggcccccacccccaagacc
ctgaaacaggtggaccgggtgaaggtccagcggatgaccaccgggatccatgaattcgac
cgggtgctgggagggggcatcgtccccggttccctgatccttctgggcggggccccgggc
atcgggaaaagcaccatcaccctggatgtttccatgaaggcggcggcccggggtgcccgg
gtgctgtatgtttccggggaagaaagcgaagcccagacagccatgcgggcagagcggctg
ggacaggccacggacgccctgcagatcatgacggccacggaactgggcaccatcctggtc
caggcccggcaggtgaagccccggctcctggtcatcgattccatccagaccatgtacaac
caggaactggaaagcgccgccggctctgtgggccaggtgcgggaatgcaccgccaagctt
ttgacctttgccaaggaaacggggatcgccatcatcattatcggccatgtgaccaaggaa
gggaatattgccggcccccggctgctggaacacatggtggacgtggtgctccagttcgaa
ggggaccggtcctacacctaccgggtgcttcgggccctgaagaaccggttcggctccacc
agcgaatgcgggatcttttccatggaagaggaagggctccgggaggtggccaatccctcc
gggctgttcctggaagccagggaagaagcggtgtccggttcggtgatcaccgcggccatg
gaagggaaccggcccatcctgacggaaatccaggctctggtgtcccataccccattcggt
ctgccccggcggacggtggtgggggtggatttcaaccgggtgaacatgctgctggcggtg
ctggaaaagcgctgcggcatgaatttcggggatcaggatgcctatgtgtgcgccgttggc
ggcatgaaagtgaaggagccggctgcggacctggccatcctgggggccctggtatccagc
taccggaaccggccggtgcccatgggggtgctggccatgggcgaagtgggccttaccggg
gaactgcgccgggtgggccttacggaccggcggatcaaagaagccgcccagctgggattc
aaacggttcatcgtccccaaagggagcttcccccagggcaaggagcccaaaggggtcacc
gtgatccaggccaggaccgtggaagaagccattgcggggatgtacagggaatag
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