KEGG   Acidaminococcus fermentans: Acfer_1173
Entry
Acfer_1173        CDS       T01151                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
afn  Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:afn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afn02048]
    Acfer_1173
Enzymes [BR:afn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Acfer_1173
Prokaryotic defense system [BR:afn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Acfer_1173
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like EcoR124_C ResIII HSDR_N DEAD G-gamma
Other DBs
NCBI-ProteinID: ADB47534
UniProt: D2RKD2
LinkDB
Position
complement(1296677..1299853)
AA seq 1058 aa
MSGFTKEADFEAALIRVLQNHGWAKEVLHHPTEQDLIQNWADILYENNQNIDRLNGVPLN
KEEMDQLLDQIRSLRTPLALNGFINGKTVSITRRNPKDALHYGKEVSLKIYDRLEIAAGQ
SRYQIVEQPEFARKNLLGQDRRGDLMLLINGMPLFHIELKRSGVPVSEAANQIAKYAEEQ
VFTGLFSLVQVFVAMNPEETVYYANPGPEGKFNPDFYFHWADFNNEPINDWQRIASELLS
IPMAHQLIGFYTVADDSDGILKVMRSYQYYASTKISDRVAKNDWEDGTQLGGYVWHTTGS
GKTMTSFKSAQLIASSKDADKVVFLMDRIELGTQSLKEYRGFADDADDVQATEDTIALLT
KLKSNDPKDTLIVSSIQKMSKIREDGMAKGREKDLEEIREKRLVFILDECHRSTFGEMLS
NIKTTFPHALFFGFTGTPVFQENEKALSTTADVFGNELHRYSIADGIRDKNVLGFDPTMV
MVYPDKALREKVGLQEAKAQTVAEALADPAKKAIYYRFVRPNEVPMAGRVGNDGNWIKGI
EDYVPKAQFETDEYQNAVVDDILKNWMTLSQGGQFHAIFATSSIPEAIRYYKKFRAKAPR
LKVTGLFDPTIDNKGGQRSLSKENGLIDMLQDYNNLYQQQFDLAGYDRFKKDVAARLSHK
APYRGCKKEQQLDLLIVVNQMLTGFDSKWINTLYLDKMLTYENLIQAFSRTNRLYNINEK
PFGSIRYYRYPHTMKQNIENAMKLYSGDKPWGLFADHLPQNLQHMNERFQDMAQVFREAG
VPDMERLPEDNTVRGKFAKLFREFSTYLQAAQIQGFTWDTQEYSITDLDTGEKTGTISVI
PTREQYKILLERYKELRNEPSGGGGGVDPTFAIDPYLTELSTGLIDSQYLNSRFEKYRKI
LTQPDVDPAEKETTLEQLHKAFASLSQEEQKYANLFLHDVEAGDVRMEPDCTFMDYIHQY
ANAERKRQVGKVTKYFGIPEEVVCQMLDAHVNEQNYNAYGRFDDVKKYIVKEDAATYITA
LEGKKVPPFRVNNMAESILKEFFLSDGKKLPDAPDLDK
NT seq 3177 nt   +upstreamnt  +downstreamnt
atgagtggatttacgaaagaagctgattttgaggccgctttgatacgggttctgcaaaat
catggatgggccaaagaggtccttcatcatccgacggaacaggacctgatccagaactgg
gcggatatcctgtatgaaaacaatcagaatatcgaccggctgaatggggtccctctcaat
aaagaagaaatggaccagctgctggaccaaattcgttctttgcggacgcctctggcactg
aacggattcatcaatggcaagacggtttccattactcggagaaatcctaaggatgccctt
cattatggtaaagaagtgagcttaaagatttacgaccgattggaaattgccgcgggccaa
agccgatatcagattgtggaacagccggagttcgctcgaaaaaatctcctgggacaagat
cggcggggagatttgatgctgctgatcaatgggatgcctttgtttcatattgagttgaaa
cggagcggggttcccgtatcagaagcagccaatcagattgcgaaatatgccgaggaacag
gtttttacagggctgttttcactggtgcaggtattcgtggccatgaatccggaagaaact
gtctactatgccaatccgggtccagagggaaaattcaatccggatttttacttccattgg
gcagatttcaataatgaaccaatcaatgactggcagcgtatagcttctgaacttctatcc
attcccatggcccatcagttgattgggttctatacagttgccgatgacagcgacggtatc
ctgaaggttatgagaagctaccaatactatgcttccaccaagatttccgaccgggtggcc
aaaaatgactgggaagatggaacccagcttgggggatatgtgtggcataccaccggttcc
gggaagaccatgacttctttcaagagtgcccagctgattgccagctccaaggatgcggac
aaggtcgtgttccttatggaccgaattgaattgggaacccaatctttgaaggaatatcgg
ggttttgctgatgatgcagatgatgtgcaggcaacagaagataccattgccctgctgacc
aaactgaaaagcaatgatcccaaagataccctgattgtttcgtccatccaaaagatgagc
aaaatacgggaagacggcatggccaaagggcgggaaaaagatctggaagaaatccgggaa
aaacgcttagtctttatcctggatgaatgtcaccggtccacctttggagaaatgctcagc
aatatcaaaacgaccttccctcatgccctattctttggctttacaggcactcctgtattc
caggaaaacgaaaaggcactcagcactacggcagatgtgtttggcaatgaactgcaccgg
tacagcattgctgatggaatccgggacaagaatgtgcttggattcgatcctacgatggta
atggtttatccggacaaagccctgcgggaaaaggtggggctgcaggaagccaaagctcag
actgtggcggaagccctggcagatcctgccaaaaaagcaatttattaccgttttgtccgt
cccaatgaagttcccatggcaggacgagtagggaatgatggaaactggatcaagggtatc
gaagattatgtaccaaaagcccaatttgaaacggacgagtatcagaatgcagtggtggac
gatatcctgaagaactggatgacgttgagccagggaggacaattccatgccatttttgcc
accagcagcattccggaagccatccggtactacaaaaaattccgagccaaagcacctcgg
ctgaaagtaaccgggctgttcgatcctaccattgacaacaaaggaggtcagcggtcttta
tccaaggaaaatgggctcatagacatgctgcaggattataacaatctttatcagcagcag
tttgatttggcaggatatgatcggttcaaaaaggatgtggctgcccggttgtcccataaa
gccccttatagaggatgcaaaaaggaacagcaactggatctgctgattgtggtgaaccag
atgcttacgggatttgattccaaatggatcaatacattatatttggataagatgcttacc
tatgaaaatttgatccaggctttttccaggaccaatcgactgtacaacatcaatgaaaaa
ccctttggttccattcggtattaccggtatcctcatactatgaaacagaatattgaaaac
gccatgaaactgtattccggggataagccctggggactgtttgctgaccatttacctcaa
aatctacagcacatgaatgaacgattccaggatatggcgcaggtcttccgggaagctggc
gttcctgatatggaacggcttccggaagacaatacagtccggggcaaatttgccaagctg
ttccgggaattttctacttatctgcaggcggcacaaatccagggctttacctgggacaca
caggaatattcgattacggatctggatacgggagagaaaacgggaaccatttctgtcatt
ccgacccgggaacagtataagatacttcttgaacggtacaaagaactgcggaatgaaccc
tcaggtggaggtggcggtgtggatcccacttttgccatcgatccttatctgacggaactt
tccaccggattgattgattcccaatatctgaattcccgatttgaaaagtatcgaaagatc
ctgacccagccagatgtggatcctgcagaaaaagagacgacgctggagcaactgcacaaa
gcttttgcgtccttgtctcaggaagaacagaagtatgccaatttgttcctccatgatgtg
gaagcaggggacgttcgtatggaaccagactgcacgtttatggattatatccatcagtat
gccaatgcggaacgaaaacggcaggtgggaaaagttacaaagtattttgggattccggaa
gaagtggtctgccaaatgctggatgctcacgttaatgaacaaaattacaatgcctatgga
cggttcgatgacgtgaaaaaatacattgtgaaagaagatgctgctacctatataacggca
ctggaagggaaaaaggtgcctcctttcagagtcaacaatatggctgaatctattttgaag
gaattcttcctttctgatggaaagaaactgccggatgcaccggatttggataagtaa

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