Acidaminococcus fermentans: Acfer_1213
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Entry
Acfer_1213 CDS
T01151
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afn03016
]
Acfer_1213
Enzymes [BR:
afn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Acfer_1213
Transfer RNA biogenesis [BR:
afn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Acfer_1213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
ADB47574
UniProt:
D2RKH2
LinkDB
All DBs
Position
complement(1343170..1344498)
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AA seq
442 aa
AA seq
DB search
MTKHYTILNYGCQMNESDSEHYAGQLSDLGYHYTEDYHDADVILINTCCVRESAEKKILG
KIGEMKQVKREDPSKVLCVTGCMAQKDGEDFLKKYPQVDLLIGTAHVNNFSAILQDYLHQ
TQRKSGMFNDLTVMPREFEGHFVRKSSYAAWVPIMYGCNNFCTYCIVPYVRGRERSRSAE
AICEEIRKAVDQGYREFTLLGQNVNSYGKDRGDKDAFAALLRQVDAIPGVERVRYMTSHP
RDMSEELIRTVAESKHVCKHFHIPVQSGSTRIMQAMNRGYTRESYLHLVDTIRKYVPEAV
LTTDIIVGFPGETEEDFQETLSLFDRVSYDAAYTFIYSKRSGTPAAAMEAQVPEAVKKDR
LNRLMELQNRHSLKHNQKLVGRTLPVMVEGLSHNNSKMWSGRTDGNKLVLWPVGERFFNP
GDLVPVTIETAQTWLLKGRAAL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcattacaccattctgaattacggctgtcagatgaacgaaagcgattcagaa
cattatgccgggcagctttctgacctgggctaccactatacggaggattatcacgatgcc
gacgtgatcctgatcaacacctgctgcgtccgggaaagcgcggaaaagaagatcctgggg
aaaatcggcgaaatgaagcaggtgaaacgggaggatccctccaaggtgctgtgcgtcacc
ggctgcatggcccagaaggacggggaggatttcctgaagaaatatccccaggtggacctg
ctgatcggcaccgcccatgtgaacaacttcagtgccatcctccaggactacctgcaccag
acccagcggaaatccggcatgttcaacgacctgacggtgatgccccgggaattcgagggc
catttcgtccggaagagcagctatgcggcctgggtgcccattatgtacggctgcaacaat
ttctgcacctactgcatcgtcccctatgtccggggccgggagcggagccgcagcgccgaa
gccatctgtgaggaaatccgcaaagccgtggaccaggggtaccgggaattcaccctgctg
ggccagaacgtgaactcctacggcaaggaccggggggacaaggatgcctttgccgccctg
ctccgccaggtggacgccatccccggggtggaacgggtccgctacatgaccagccatccc
cgtgacatgagcgaggaactgatccgcaccgtggcggaaagcaaacatgtgtgcaaacat
ttccacattcccgtccagagcggcagcacccggatcatgcaggccatgaaccgggggtat
acccgggaatcctacctgcacctggtggacaccatccggaaatacgtgcccgaagcggtg
ctcaccacggacattatcgtggggttccccggagaaacagaagaggatttccaggaaacc
ctcagcctgttcgatcgggtaagctatgacgcggcctacaccttcatctattccaagcgg
tccgggactccggcggccgccatggaagcccaggtgccggaagcggtgaagaaagaccgg
ctgaaccggctcatggaactccagaaccggcacagcctgaagcacaaccagaaactggtg
ggacggaccctgccggtgatggtggaagggctcagccacaacaacagcaaaatgtggagc
ggccgcaccgatgggaacaaactggtgctgtggccggtgggagaacggttcttcaacccg
ggagacctggtcccggtaaccatcgaaaccgcccagacctggctccttaaaggtcgtgct
gccttatga
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