Acidaminococcus fermentans: Acfer_1243
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Entry
Acfer_1243 CDS
T01151
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afn03009
]
Acfer_1243
Enzymes [BR:
afn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Acfer_1243
Ribosome biogenesis [BR:
afn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acfer_1243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADB47604
UniProt:
D2RKK2
LinkDB
All DBs
Position
complement(1373248..1373982)
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AA seq
244 aa
AA seq
DB search
MEQTKERLQKVMAAAGVASRRECEKIILAGRVQVNGKPVTELGTRVGKADRITVDGKALH
RKSARHTYLLYKPGGVVTTMKDPQGRRTVADLMAGLHQRLYPVGRLDYLTEGLLLMTNDG
ELAQHLTHPSHHVDKTYEVEVHGRVPEEKLDVLRLGVPLEDGLTAPAVVYVKKWDPEKNL
TRFTVTIHEGRNRQVRRMCDFIGFPVKSLKRIQVGTLTLEGMKKGEFRELTPEEVASLES
PVEK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaccaaggaacggctgcagaaagtcatggcagcggccggtgtggcatcacgc
cgggaatgtgaaaagatcatcctggcaggacgggtccaggtgaacgggaaaccggtgacc
gaactgggcacccgggtggggaaggcggaccggatcaccgtggacgggaaagccctccac
cggaaaagcgcccggcacacctatctgctgtacaagcccgggggggtggtgaccaccatg
aaggatccccagggccggcggacagtagcggacctgatggccgggctccatcagcggctg
tacccggtggggcggctggattacctgaccgaagggctgctgctgatgaccaacgacggg
gaactggcccagcatctgacccatcccagccaccatgtagacaagacctatgaagtggaa
gtccacggccgggtgccggaagaaaaactggatgtgctgcggctgggggtgcccctggaa
gatgggctcacggcgccggcggtggtctatgtgaagaagtgggatccggaaaagaacctg
acccggttcacggtgaccatccatgagggaaggaaccggcaggtccggcggatgtgcgat
ttcatcgggttcccggtgaaatccctgaaacggatccaggtggggaccctgaccctggaa
ggcatgaaaaagggagaattccgggaactgactccggaagaagtggcctccctggaaagc
ccggtggagaaatga
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integrated database retrieval system
