Acidaminococcus fermentans: Acfer_1332
Help
Entry
Acfer_1332 CDS
T01151
Name
(GenBank) Exodeoxyribonuclease V
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afn03400
]
Acfer_1332
Enzymes [BR:
afn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Acfer_1332
DNA repair and recombination proteins [BR:
afn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Acfer_1332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DEAD
AAA_16
AAA_30
DUF7495
PSI_PlexinA-B
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
ADB47693
UniProt:
D2RKU1
LinkDB
All DBs
Position
complement(1472143..1475493)
Genome browser
AA seq
1116 aa
AA seq
DB search
MASFTPQQQEAISTLDRNVSVSAGAGSGKTRVLVERFLKILQERKATAQEILAITFTRKA
AREMRERVQKGILDRLGAAAEPEEKAYWQEQLQLADRAPITTIDSFCSQVLRENPVEAGL
DPNFAVKEEYQIRAFREETAQAFVQKEIQQQDGDLAALLDLYPADRLARILVALIDDLPE
ILALPGGLAAPYEVSLGGEEAGKIEAEGALDALLESRDLAGPKSRAKLDALADQREAIHQ
WIAAGEYSKASAALKPVSATGKIKDLVKEAKEALARLETLSLDGAGAEQARHWENLLGRF
RQALLDAAESREIYSFGYLSGRAVELLEKRPNVLFRYKSRFRYLMVDEFQDTNEEQKRLV
YLLSGGSSRSLQGRNLFVVGDAKQSIYRFRGADVSVFRQVRDAIGETGGDNIVMDDNFRS
APEIIEACNTLFDDLLGTDSRSDVTAQPLHPHQPSSRKPVFAVLKKGECTLEECQQAEGR
YVAQAIRQLREDTGLPYGQMAILLPAIHLSRQYEEALTALGIKSQVSDGKGFYERQEVVD
WISLLTFLLNPRKDWALAGFLRSPYAGISDRQLTDLLKPWPELSLWESLRQSLEEPFVTL
SRKLEALHRTALFQSLPELMDAFQEAFAVEPTLLAQRGGREKLANFRKLRALGVKGAMED
GDTARDFLDRLNLMRRLSARESAANQEADPEAVQIMTIHKSKGLEFPAVFLPDLSKKNHN
DTLGIQFLPGQGFGVRVPDAQGNLLETSVYTRLKGEKARLERAEKQRQLYVAMTRAEKYL
YLINVDESKEGSRPPDPDKEKWGQSLQRVFAPEGPHGDQMDWEKLDVAEILENQETGQPG
AGEAFVLDPAVYDRGRPVTVPRDLELSASALLEYDTCPRSFYYHYFRHMPGIDPETVGEG
SHRISAIDLGTYVHRVLELLQEEPEEEALAEALEVLDRTGAEKKVFAREGRKLVEQYCAS
PLYQELKDLPAQAERDFALPLFQLEQGRAVFQGSVDRLVTLPDGRLGIVDYKTGHPPTDG
EEKQGYTRQLTIYALAAEILYPGQKVAWARLHFLQDCSSWELKDREQEEEKLKALVENLL
IWDKEEQFPARKEGCQWCPYRYFCPEGTGEQPAVDR
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggccagttttaccccacagcagcaggaagccatctccaccctggaccggaacgtgtcg
gtatccgccggcgccggttccggcaagacccgggtgctggtggaacggttcctgaagatc
ctccaggagcggaaggccaccgcccaggaaatcctggccatcacctttacccggaaagcc
gcccgggaaatgcgggaacgggtccagaaagggatcctggaccggctgggagcggccgcc
gagccggaagaaaaagcctactggcaggagcagctccagctggcggaccgggcgcccatc
accaccatcgacagcttctgttcccaggtgctccgggaaaacccggtggaggccgggctg
gaccccaatttcgccgtgaaggaagaataccagatccgggccttccgggaagagaccgcc
caggcctttgtccagaaggaaatccagcagcaggacggggacctggccgccttgctggac
ctatatccggcggaccggctggccaggatcctggtggccctcatcgatgacttgccggag
atcctggccctgcccggaggcctggccgccccctatgaagtcagcctgggaggagaagaa
gcggggaaaatcgaagcagaaggggccctggatgccctgctggagagccgggacctggca
ggccccaaaagccgggcgaaactggatgccctggcagaccagcgggaagccatccaccag
tggatcgccgccggggagtatagtaaggcctccgctgccctgaagcctgtttccgccacc
gggaagatcaaagacctggtgaaggaagccaaagaggccctggcccggctggaaaccctc
tctttggacggggcgggggcggagcaggcccggcactgggagaatctgctgggccggttc
cgccaggccctgctggatgccgccgaaagccgggaaatctacagcttcggctatctctcc
ggacgggcggtggagctgctggaaaagcggcccaatgtgctcttccggtacaaaagccgg
ttccggtacctgatggtggacgaattccaggacaccaacgaagaacagaaaagactggtg
tacctgctcagcgggggcagcagccggagcctccagggacggaacctgttcgtggtgggg
gatgccaagcagtccatctaccggttccggggagcggatgtcagcgtgttccggcaggta
cgggacgccatcggtgagaccggcggggacaacatcgtcatggacgacaacttccggtcc
gctccggaaatcatcgaagcctgcaacaccctgttcgacgatctgctgggcaccgacagc
cggtccgacgtgaccgcccagcccctccatccccaccagccctcttcccggaagcctgtg
ttcgcggtgctgaagaagggagagtgcaccctggaggaatgccagcaggcggaaggacgg
tacgtggcccaggccatccggcagctccgggaagacaccgggctcccctacggccagatg
gccatcctgctgccggctatccatctgtcccggcagtatgaggaagccctgaccgccctg
ggcatcaaaagccaggtcagcgacggcaagggattctacgaacggcaggaggtggtggac
tggatcagcctgctgaccttcctgctgaacccccggaaggactgggccctggccgggttc
ctccggtccccctacgccgggatcagcgaccggcagctgacggacctgctgaagccctgg
ccggaactgagcctgtgggaaagcctccggcagagcctggaagaacccttcgtgaccctc
tcccggaagctggaagccctgcaccggacggccctgttccagtccctgccggaactgatg
gatgccttccaggaagcctttgcggtggaacccaccctgctggcccagcggggaggacgg
gaaaaactggccaacttccggaagctccgggccctgggggtgaagggagccatggaagac
ggggatacggcccgggatttcctggaccggctgaacctgatgcgccggctctccgcccgg
gaaagcgccgccaaccaggaagcggatccggaagcggtgcaaatcatgaccatccacaaa
tccaaggggctggaatttccggcggttttcctgccggatctgtccaaaaagaatcacaac
gataccctgggaatccagttcctgcccggccagggattcggggtcagggtgcccgatgcc
caggggaatctgctggaaacctccgtgtacacccggctgaaaggggaaaaagcacggctg
gaacgggcggagaaacagcggcagctgtatgtggccatgacccgggcggaaaaatacctg
tacctgatcaatgtggatgaaagcaaagaaggaagcaggcccccggatccggacaaggaa
aaatggggccagtccctccagcgggtctttgcgccggaagggccccacggggaccagatg
gactgggaaaaactggatgtggcggagatcttggagaaccaggagaccggacagccggga
gccggggaggcttttgtgctggatcctgcggtgtatgaccggggccggccggtgaccgtg
ccccgggacctggaactgtctgccagcgccctgctggaatacgatacctgtccccggagc
ttctactaccattatttccgccacatgcccggaatcgatccggaaacggtgggagaaggg
tcccaccggatctctgccatcgatctggggacctatgtgcaccgggtgctggaactgctc
caggaagagccggaagaagaggccctggccgaagccctggaagtgctggaccggaccggg
gcggagaagaaggtattcgcccgggaaggacggaaactggtggaacagtactgtgccagc
cccctgtaccaggaactgaaggacctgcccgcccaggcggaacgggatttcgccctgccc
ctgttccaactggagcagggacgggcggtgttccagggaagtgtggacagactggtgacc
ctgccggacggccggctggggatcgtggattacaaaaccggccatccgccgacggatggg
gaggaaaagcagggatatacccggcagctgaccatctatgccctggcggcggaaatcctg
tatccggggcagaaagtggcctgggcccggctccatttcctccaggactgctcctcctgg
gaactgaaggaccgggagcaggaagaggaaaagctgaaggccctggtggaaaacctcctc
atctgggacaaagaagaacagttccccgccaggaaggaaggatgccagtggtgtccgtac
cggtatttctgtccggaggggacaggagagcagccggcagttgaccgctga
DBGET
integrated database retrieval system
