Acidaminococcus fermentans: Acfer_1338
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Entry
Acfer_1338 CDS
T01151
Name
(GenBank) conserved hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afn03016
]
Acfer_1338
Enzymes [BR:
afn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Acfer_1338
Transfer RNA biogenesis [BR:
afn03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Acfer_1338
Prokaryotic type
Acfer_1338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ADB47698
UniProt:
D2RKU6
LinkDB
All DBs
Position
1482945..1483745
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AA seq
266 aa
AA seq
DB search
MEILFLGTGHAISTRCYNTCYVLRQNERYLLVDGGGGNGILRQLKRARLPWQKIKDIFVT
HRHMDHVLGIFWVIRMIVKAMKRGTYVGEARIYGHDEVITLLRSTARLLLDPGDLKFLDT
RLHFITVEDGETRKIRGWDVTFFDIHSTKAKQYGYILESNGHKLGCCGDEPMNDHNFTRL
SGSQWLLHEAFCLYRERDRFRPYEKHHSTVREACENGDRLQVPNLILYHTEDTHLAQRKE
LYTAEGKEYYQGNLLIPDDLERVQLW
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttgtttttgggtacaggccatgccatctccacccggtgctacaacacctgc
tatgtgctgcgccagaatgaacgctacctgctggtggacgggggcgggggcaacgggatc
ctgcgccagctgaagcgggcccggctgccctggcagaaaatcaaggatattttcgtcacc
caccggcatatggaccatgtgctggggatcttctgggtgatccggatgattgtgaaggcc
atgaaacggggcacctatgtgggagaagcccggatctacggccacgatgaggtgatcacc
ctgctccgttccaccgcccggctgctgctggacccgggggacctgaagttcctggatacc
cggctccatttcatcaccgtggaagacggggaaacccggaagatccggggctgggacgtg
acctttttcgacatccattccaccaaggccaaacagtacggctacatattggaaagcaac
ggccacaaactgggctgctgcggcgacgaacccatgaacgaccacaattttacccggctt
tccggcagccagtggctcctccacgaagccttctgcctgtaccgggaacgggaccggttc
cggccctatgaaaagcaccattccaccgtgcgggaagcctgcgaaaacggcgaccggctc
caggtgcccaacctgatcctctaccacaccgaggacacccacctggcccagcggaaggaa
ctgtacaccgccgaaggcaaggaatactaccaggggaatctgctgattcccgacgacctg
gaacgggtgcagctgtggtga
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