Acidaminococcus fermentans: Acfer_1353
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Entry
Acfer_1353 CDS
T01151
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afn03016
]
Acfer_1353
Enzymes [BR:
afn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Acfer_1353
Transfer RNA biogenesis [BR:
afn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Acfer_1353
Prokaryotic type
Acfer_1353
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADB47713
UniProt:
D2RKW1
LinkDB
All DBs
Position
complement(1499118..1500011)
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AA seq
297 aa
AA seq
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MDGIFNVLKPPGMTSHDVVGALRKILHMKKIGHGGTLDPLAAGVLPVFTGMATRFLEYAA
HEEKSYRAELTFGFQTDTGDTEGAVIAESPVRDLTAEEIEAALASFRGEGTQIPPMYSAI
SVGGTKLYKLARQGIEVKREPRPITLYELEKVDYTGKTLVFDVTCSKGTFIRTLCEDLAA
KLGMKGTMSFLLRRRAGVFRLEDAHTLQEIAADPEGCCMGVEPILAGFPKKIVNALQGRR
IAQGVATTLPGLTEGTLYQLWTRDGVLVGLARAVDGRLRAHKIIHIPDVETRTEEQP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatgggattttcaacgtactcaaaccaccgggcatgaccagccatgatgtggtgggg
gccctgcggaaaatcctccatatgaagaaaatcggccacgggggcaccctggatcccctg
gccgccggggtgctgccggtgttcaccggcatggccacccgattcctggaatacgcggcc
cacgaggaaaaaagctaccgggcagagctgaccttcgggtttcagaccgacaccggggat
acggaaggggcggtgatcgccgaaagtcccgtacgggacctgacggcagaggaaatcgaa
gccgccctggcctccttccggggggaagggacccagatcccgcccatgtattccgccatc
agtgtggggggcaccaagctgtacaagctggcccgacagggcatcgaagtgaagcgggag
ccccgtcccatcactctctatgaactggaaaaggtggattacaccggaaagaccctggtg
ttcgacgtgacctgctccaaggggacttttatccggaccctgtgtgaggacctggcggcg
aagctggggatgaaggggaccatgagtttcctgctccggcggcgggccggggtcttccgg
ctggaagacgcccataccctccaggagatcgccgccgatccggaaggctgctgcatgggg
gtggaacccatcctggccggctttcccaaaaagattgtgaatgccctccaggggcggcgg
atcgcccagggagtggccaccaccctgcccgggctgacggaagggaccctgtaccagctg
tggacccgggacggggtgctggtgggactggcccgtgccgtggacggccggctccgggcc
cacaagatcatccacatcccggacgtggaaacaaggacggaagaacaaccatga
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