Acidaminococcus fermentans: Acfer_1736
Help
Entry
Acfer_1736 CDS
T01151
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afn03009
]
Acfer_1736
Enzymes [BR:
afn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Acfer_1736
Ribosome biogenesis [BR:
afn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Acfer_1736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
Cons_hypoth95
Methyltransf_4
MTS
Methyltransf_15
Methyltransf_11
PCMT
PrmA
Ubie_methyltran
Methyltransf_12
FtsJ
TRM5-TYW2_MTfase
N6_N4_Mtase
RrnaAD
UPF0020
TPMT
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ADB48092
UniProt:
D2RLZ0
LinkDB
All DBs
Position
1916688..1918064
Genome browser
AA seq
458 aa
AA seq
DB search
MKENKIPFKLKENIELTITGLGSSGEGVGKVSGFTFFVPGALPGERIQAQVTLLKKSYGQ
ARLLKLLVPSPDRVKPPCPVYAQCGGCQLQHLSYPAQLALKRQTVVDAMERIGHFTKLSV
QETLGAEDPWHYRNKMQVPAAQGRNHTLAIGCYAQGTHRVIDVKDCLIQQQANNRIVQVV
RSWMEKYRIPALEEDARRGIVRHIMGRVGVQTGEVMAVLVTNEPQVPHLKDLTALLRQEI
PGFTTLVQNLNTRHTNVIMGPKNKVIWGPGVIHDRLGKFTFTISPHSFFQVNTLQAEKLY
ETALQYAALTGKEKVIDAYCGTGTITLFLAQKAKRALGIEIVEPAIRDARQNARDNQVSN
VDFLCGDAAKEMPELVRQGSRPDVVVLDPPRAGCEQRVLEAIAKVRPQRVVYVSCNPASL
ARDAAILRDKGFVVRKVQPVDMFPHTSHVETVCLLTLR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaataaaattccctttaaactcaaagaaaacattgaactgaccatcaccgga
ttgggcagctcaggcgaaggagtgggcaaagtcagcggctttaccttcttcgtccctggt
gccctgcccggggaacggatccaggcccaggtgaccctgctgaaaaaaagctacggccag
gcccgtctgctgaagctgctggttccctccccggaccgggtgaagcccccttgtccggtg
tacgcccagtgcggcggctgccagctccagcatctgtcctatccggcccagctggccctg
aaacgccagaccgtggtagatgccatggaacggattggccactttaccaaactcagcgtc
caggaaaccctgggagcggaagacccctggcattaccggaacaagatgcaggtgccggcg
gcccagggacggaaccataccctggccatcggctgctatgcccagggcacccaccgggtc
attgacgtgaaggactgcctgatccagcagcaggccaacaaccggatcgtccaggtggtc
cggtcctggatggaaaaataccggatcccggccctggaagaagatgcccgccggggcatc
gtccgccacattatgggacgggtgggggtccagaccggagaagtcatggccgtgctggtg
accaacgagccccaggtcccccatctgaaggacctgacggccctgctccgccaggaaatc
cccggcttcaccaccctggtccagaacctcaacacccggcacaccaatgtgatcatggga
ccaaagaacaaagtcatctggggtcccggggtaatccacgaccggctggggaaattcacc
ttcaccatctctccccattccttcttccaggtgaacaccctccaggcggaaaaactctac
gaaaccgcccttcagtatgcggcgcttacgggaaaggagaaggtcatcgacgcatactgc
ggtaccggcaccatcaccctgttcctggcccagaaggcaaaacgggccctgggcatcgaa
atcgtggaaccggccattcgggatgcccggcagaacgcccgggacaaccaggtgtccaat
gtggactttttatgcggggatgcggccaaggaaatgccggaactggtccggcagggcagc
cgtccggacgtggtggtcctggatcctccccgggccggctgtgaacagcgggtgctggag
gccattgccaaagtccgtccccagcgggtggtgtatgtttcctgcaatccggcctccctg
gcccgggatgcagccattttgcgggacaaagggttcgtggtccggaaagtccagcctgtg
gacatgttcccccacaccagccatgtggaaaccgtctgtctgctgacgctgcggtaa
DBGET
integrated database retrieval system
