Acidaminococcus fermentans: Acfer_1775
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Entry
Acfer_1775 CDS
T01151
Name
(GenBank) Integrase catalytic region
Organism
afn
Acidaminococcus fermentans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_38
HTH_7
HTH_23
HTH_28
HTH_31
HTH_3
Sigma70_r4_2
GerE
HTH_30
DUF1804
TnsD
NUMOD1
HTH_40
HTH_29
HTH_17
HTH_26
DUF3389
Terminase_5
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ADB48129
UniProt:
D2RM27
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Position
complement(1960419..1961849)
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AA seq
476 aa
AA seq
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MKDYGQIRQMYIRDGKSIRQIAREMHISRNTVAKYCKGNALPGIRCEYHRTSAVITEEVT
RFIQSCLDEDAKEPNKKQHHTAKRIYDRLVEGTGFTGGASTVRRCVHLLRGNLQEAFVPL
AHLPGDAMQIDWGEAVVYLKGVRTKVNFFCARLCYSCAPFVVCFRRKNTEALLEALRKAL
EFFGGVPAKVIFDNDRVAVKEKGGKEAIAQEKYEAFAAHYCFHTVFCNVRSGNEKGLVEN
LVGWVRRNVFVPVPRVDALDELNRLLLDKCKVYANTHKIPGRENPVKDLLLEDQKRLCPL
PGSPFDASRAAVCRVTPFSVVRFVANDYSVPVKYVGQEVTVRAYAEQIRIFAKGELIAEH
ARNYGQNQQILKLAHYLPLLEYKPRSILEAKPVRQNLSAALLQFLETNAFSSEQLVEILR
LCAADGENAFWEHKEQFMVSDRKAHILTDPVKVQQTDLSMYDQLLQEGGTMCRTQV
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattatggtcaaattcgccagatgtacattcgcgatggaaaatctatccgccag
attgccagagaaatgcatatctcccgtaatactgtggccaagtattgcaaaggaaatgca
ctcccgggcatccgctgcgaatatcatcggacatctgcagtgattacagaggaggtgact
cgattcatccagagctgtctggatgaagatgcgaaagaacccaataagaagcagcaccac
acagccaagcggatttatgaccgcctggtagaaggaactggatttacaggaggtgcaagc
acagtccggcgctgcgttcatctgttacgtggcaatcttcaggaagccttcgtccctttg
gctcaccttccaggtgatgcgatgcagattgattggggtgaagctgtggtttacctcaaa
ggagtgcgtactaaagtcaatttcttttgtgcccgcctttgctacagctgtgctcctttc
gtggtctgtttccgcaggaagaatacggaagctttacttgaagcattgagaaaagctctg
gaattctttgggggcgtccctgctaaggtcatttttgacaatgaccgggtagccgttaag
gaaaaaggtggcaaagaagccattgcccaggaaaagtatgaagcatttgcagcccattat
tgcttccataccgttttctgcaatgtccggagtggaaatgaaaaaggactggtggagaat
ctcgtaggctgggtccgccggaatgtctttgtccctgtacccagagtagatgcgctggac
gaattgaacagactcctgctggataaatgcaaggtgtatgcgaatacgcataaaatccct
ggacgggagaaccctgtaaaggatctgctcctggaagaccagaaacgtctctgcccactg
ccgggcagcccttttgatgcaagcagagcagcagtctgccgagtaacacccttttctgtt
gtccgattcgtcgctaacgattattctgtgcccgtgaaatatgtgggacaggaggtcacg
gtgcgagcctatgctgaacagattcggatctttgccaagggggaactgattgctgaacac
gccagaaactatgggcaaaaccagcagattctgaaacttgcgcattatctgccgttgctg
gaatacaagccgcgcagcatcctggaagcaaaaccggtacggcagaacctcagtgctgcc
ctgctacagttcctggagaccaatgcattcagcagcgaacagctggttgagattctgcgg
ctatgtgctgccgacggagagaacgctttttgggagcacaaagagcaatttatggtttcc
gacaggaaagcgcatatccttaccgacccggtaaaagtgcagcagacagatctttcaatg
tatgaccagcttttacaggaaggaggcactatgtgcaggacgcaggtgtaa
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