Acidaminococcus fermentans: Acfer_1776
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Entry
Acfer_1776 CDS
T01151
Name
(GenBank) adhesin HecA family
KO
K15125
filamentous hemagglutinin
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
afn00536
]
Acfer_1776
Glycosaminoglycan binding proteins [BR:
afn00536
]
Heparan sulfate / Heparin
Microbial pathogens
Acfer_1776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
DUF2345
SHOCT
Motif
Other DBs
NCBI-ProteinID:
ADB48130
UniProt:
D2RM28
LinkDB
All DBs
Position
complement(1962322..1966998)
Genome browser
AA seq
1558 aa
AA seq
DB search
MRNHNASIGVVESQKIHNLTFVRTKSQTSHREVTESRPGVIASGENLEIQGNVTNENSQL
ASGGTLHIKGKLDNLAKENQTYTVTFGTTQGSYTYKRGWPHKSRRRGYKSRVFMTPQVEQ
GAPASLGISQVLDGSGQAPEKTEISQSQRQAVSHFLDPFGVSFAQAAQGKEQWQNLLTGS
LYQVHPESTARYLMETDPKFTSRKQFLSSDYFFQKLQWDPDKVPKRLGDGFYEGMLVRQQ
ILDRTGNRYLEGYSDEESEFRALMDAGVLYAQKTGLQPGIVLSEEQMAQLTSDMVWLENR
TITYEGKPYEVLIPRVYLRPNRELELKADGSLVSGKKLWVETKVAIANEGTLQGKEVILE
AGSLKNLGILQGDSLFAHTRGNLESTGEIRGNAQVKLLADDELHIRSTENRLAHQDVVDQ
VAGIAVTGKAGVLLLQSGKDLTVSGAVLQNLGEQGKTILKAGSSLQLGTLQLSSDKDMTL
DSKNYLRTQRRTEMGTTMKAAGDVRLEAGDDMTLKAAQISSTQGEVELQAGGNLTLEAGK
AYAGDQYALSHRERSLVSRSSTETRSDEQHEVILGRALSGKSLMAKAGNDFTLRGTSMAA
DGDIRLQAGGDLSLDTVDQKDISGVYQKTKRKGLMGAGMGILIGSEKKSGQVQQETHTQV
GSTLGSLGGNVNLEAGNRLQTWGSSILASKDITLSGKEIQVENAEDTYHYQEKQEYRRTG
LTASLGGDYMDAAGTVSTLAQRAGTVRDGRLAALYGTEAALSTAKGLGDIQKSWDTAQKA
AQEYRYANIFGKGKQASEAFDKMKAAKEKLPFVGKTAVTLNLGMGTQHSSHAVEINGTRA
SGSQVQAGGNVTLKADGKDILLKGSQVSGQNVELSAGENIFLQAGKNQETIQEKESAKGG
NVGISMGRTGLVGISAEGGMVKGTSQEEKSYYTNAAVQADRKLTFTTGKDIHIAGGTLSG
ESVNGQVSGNLQLDSLQDTHTYQEKRKSAGFSADYGLGAGTLSGMGSLSRENTESRYRSV
KEQTGIYAGQNGFALEVGKETGLKGAVISSQAETAKNTLSTGTLRYEDLRNEAAYSINSE
GMQSGISGIRGKNGTTYYGGIAPIQDTPVKGRKSSETLSGIAQGNMTIRNSEEQKQELDK
LNRNTQQALQKLGEIFDKQKIRERKELAGAFGALAFRTIGDIGLKNGWKEGGIEKTTLHA
MIGGIMGKLTGNQFIVGGGAAAVNELMQKEMAKWTGTNPQLQQWASMVIGGTAAKLVGGD
WRMGTASAGSGTRYNFLPHEDQQYLLRDIEKYENGELTQEEFVQKLKYYCAKDLYYNDGL
NTDYISTELKEGGNPIISSQIINYSSLEDFFNAQGINTDQGLSYALAQYAKGFGVEYNYD
NPELWNIINTKIGPQTGWMNKLNEYSIDLLSSTFYNKTIIDTTSLNEAEKWFDLRNALNI
NLAISSIDQSIELNNGFYGKIPAGLAGKASFVISIVEESKNYEGKKLGIAVISDTAGSAL
GDVLGVNLIKTINWNAGLNYNKPVLMIFIGKTLAQSMGASLGDYISYYLKKNIFNLEE
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaaaccataatgcctccatcggggtggtggaaagtcagaaaatccacaacctgact
ttcgtacgcacaaaatcccaaaccagccaccgggaagtgacagaaagccgtcccggagtc
attgccagcggggaaaacctggaaatccaggggaatgtgaccaatgagaatagccagctt
gcttccggagggaccctccatataaagggaaaactggacaatctggccaaagagaaccag
acgtacaccgtcacttttggtaccacccagggcagttatacatacaaacggggctggccc
cacaaatcccgacggagagggtacaagtcccgggtattcatgacgccccaggtggaacag
ggggcgccggcttctttgggaatctctcaggtgctggatggcagcggccaggctccggaa
aaaacagaaatcagccagagccaacggcaggccgtcagccatttcctggatccatttggg
gtttcctttgcccaggcagcccagggaaaagaacagtggcagaatctgctgaccggttct
ttgtaccaggtccatccggaaagcacggcccggtacctgatggaaacggatccgaagttc
accagcaggaagcagttcctttcctctgactatttcttccaaaagctccagtgggacccg
gacaaagtgcccaaacggctgggcgacgggttctatgaagggatgctggtccgccagcag
atcctggaccggaccgggaaccggtacctggaagggtacagcgatgaagaaagtgaattt
cgggccctgatggatgccggggtcctctatgcccaaaagacagggctgcaacccggcatc
gtcctgagcgaagaacaaatggcccagctgaccagcgatatggtgtggctggaaaatcgg
accatcacctacgaaggaaaaccctatgaagtattgattccccgggtctatctgcggccc
aaccgggaactggaactgaaagcagatgggagcctggtcagcgggaaaaaactatgggtg
gagaccaaggtggccattgccaacgaagggactctgcaggggaaagaagtgatccttgaa
gccgggagcctgaagaacctgggtattctccagggagacagcctgtttgcccatacccgg
ggcaatctggaatctaccggagaaatccggggcaacgcacaggtaaaactcctggcagat
gatgaactgcacatccggagcacggaaaatcgactggcccatcaggatgtggtggaccag
gtggcaggaatcgcggtcaccgggaaagctggagtactgctgctgcagtctggaaaagac
ctgacagtatccggcgctgtattgcagaacctgggagagcagggaaagaccatcctcaaa
gcagggagttctttacaattgggaactctgcagctttcgtccgataaggatatgaccctg
gacagcaaaaattacctgcgtacccagagaagaaccgaaatggggacgactatgaaagca
gcaggggatgtccggctggaagccggggacgatatgacgctgaaagctgcccagatttcc
agtacccagggagaagtggagctgcaggctggcggtaatctgaccctggaagcagggaaa
gcctacgccggggaccagtatgccctgagccacagagaacggagccttgtaagccgcagc
agtacggaaacgcggagcgatgaacagcacgaagtcatcctgggcagagccctcagcggg
aaaagtctcatggccaaagcaggaaacgattttaccctgagaggaacttctatggccgca
gatggagatatccgcctgcaggcaggtggtgatttgagtctggatacggtggaccagaaa
gatatctctggagtctatcagaagacaaagagaaaaggtctcatgggagccggaatgggc
atcctgatcggcagcgaaaagaaaagcgggcaggtgcagcaggaaacccatacccaggtg
gggagcacgctgggaagcctcgggggaaatgtgaatttggaggcgggaaatcgcctgcag
acatggggaagcagcatattggccagtaaggatattaccctctccgggaaagaaatccag
gttgaaaatgcggaagacacctatcactatcaggaaaaacaggaatatcggcggaccggt
ctcacggcatcgctgggtggagattatatggatgctgcgggtacagtatcaactctggcg
caaagagccggtacagtgcgggatggccgactggctgctttatatggtacggaggccgcc
ctcagtacagccaaagggctgggtgacatccagaaaagctgggatacagcacaaaaagca
gcccaggagtatcgctatgccaatatctttggcaaagggaagcaagccagtgaagccttt
gataagatgaaagcggctaaagaaaagctgccttttgtggggaaaacggcagtgaccctg
aacttgggcatgggaacccagcatagctcccatgcggtggaaatcaatggaacgcgtgcc
agtggcagccaggtgcaggcgggaggcaacgtaaccctgaaggcagatggcaaggatatc
ctgctgaaaggaagccaggtttccggacagaacgtggaattgtcagctggagaaaatatc
ttcctgcaggccgggaagaatcaggaaacgattcaggaaaaggaaagcgcaaaaggcgga
aacgtgggaatttccatgggaaggaccggtctggtgggaatctcggcagaaggcggcatg
gtgaagggaacaagccaggaagaaaaaagttattatacaaatgctgctgtacaagcagac
cgaaaacttacttttactactggaaaagatatccatatagcgggaggcaccctttctggg
gaaagcgtaaacggccaggtaagcggaaatctgcagctggatagtttgcaggatactcat
acgtatcaggaaaaacggaagtctgccggcttctccgccgattatggtttgggagctggt
acgctcagcggcatgggaagcctgtcgcgagaaaacacagaaagccggtaccggagcgtg
aaagaacagaccgggatttatgccggccaaaacggttttgccctggaagtagggaaagaa
acaggtttaaaaggcgctgtcataagcagccaggcagaaacagcaaaaaatactctgtct
acaggaaccctgcgatatgaagacttgaggaatgaagccgcatattctataaacagtgag
ggtatgcaaagcggaatcagcggaatccgtgggaaaaatggaaccacttattatggcggt
attgcaccaatccaggatactcccgtgaaaggtagaaaaagcagtgaaactttgtcagga
atagcgcaaggaaatatgacaattcgaaattccgaagaacaaaagcaagaattggataaa
ttgaaccgtaatacccaacaggcactccaaaagctgggagagatatttgataaacaaaaa
atcagggaacggaaagaattggcgggagcctttggagctttggcttttcgcacgattggg
gatataggcctaaaaaatggatggaaagagggaggaatcgaaaaaacgactctccatgca
atgattggtggaatcatgggaaaattgacaggaaatcaatttatagttggagggggtgca
gctgcagttaatgaactgatgcaaaaagaaatggctaaatggactggaacgaacccgcag
ctgcaacaatgggcaagtatggtaattggcggcacggcagcaaaattggtcggcggagac
tggagaatgggaacagcgtctgcaggaagcgggacaaggtacaatttcctgccacatgag
gaccagcaatatcttttacgtgatatcgaaaaatatgaaaatggtgaattgacgcaagaa
gagtttgtccagaaattaaaatattattgtgctaaggacttgtattacaatgatggcctg
aacacggattatatcagtacagaactaaaagaaggcggaaatccaatcatttcttctcag
attatcaattattcttctttggaagattttttcaatgcacaaggtatcaatactgaccaa
ggtctgagctatgcgttggctcagtatgctaaggggtttggtgtggaatacaattacgat
aatccggaattatggaatatcataaacacgaaaatagggcctcaaactggatggatgaat
aaactaaatgaatactctatagatttattaagttcaactttttataataaaacgattatt
gatacaacatctttaaatgaagcggaaaaatggtttgatttaagaaatgcacttaatatt
aatttagctattagttctattgatcaaagtattgaattaaataatggcttttatggtaaa
ataccggctgggttagcaggaaaagcatcttttgtaatttcgattgtggaagaaagcaaa
aattatgaggggaaaaaattagggatagccgttattagtgatactgctggttctgcttta
ggtgatgtattaggagtaaacttaatcaaaacaataaattggaatgctggacttaattat
aacaaaccagtattgatgatatttattggaaaaaccttagcacaaagtatgggggcaagt
ttaggagactacattagttattatcttaagaaaaatatatttaatttggaggagtga
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integrated database retrieval system
