Acidaminococcus fermentans: Acfer_1872
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Entry
Acfer_1872 CDS
T01151
Name
(GenBank) S-layer domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
afn
Acidaminococcus fermentans
Brite
KEGG Orthology (KO) [BR:
afn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afn02000
]
Acfer_1872
Transporters [BR:
afn02000
]
Other transporters
Pores ion channels [TC:
1
]
Acfer_1872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
YadA_anchor
YadA_stalk
YadA_head
DUF1664
DUF6779
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
ADB48226
UniProt:
D2RMC4
LinkDB
All DBs
Position
complement(2086408..2088939)
Genome browser
AA seq
843 aa
AA seq
DB search
MKRINQAVRKQTEKGRRVVPEQVAAGPEGKGKKLRSAALTLLILSALGNCTYAADTATGA
GNGVAYGTGSNAPKAENVAIGKGAGISYSNGASNATGDIVVGNGANINNYASQGGSIAIG
KNAKVENMAGGGEASFAFGQTTYSGSWFSSPRIPADPTKVVGSIAIGDNTFARTGSTMIG
SHNYKGELGDTTVDSASTRTDALNVYATTIGANSFSNGAFTTSTGVYNIISSEYNGGRLA
NPVKNLGATINGALNSIESKTGSYYSGIANTISGVANRAFNSNGALIYGAGNEITNSVTS
LSGVPSDSGASAKEFAEKLRTAIAASDSGGATLAIGGGNKADYTEKTAIIGVGNQVTGAS
AAVSSHNMVSGYKNTASNVQHVSVIGSGNTVKDTNTALLLGDKRTLSGATNSVVLGSADN
MTTTDQKNVVILGHNANATAEGGVALGSGSLASVGAGEAGYDPSTKQASTDTSSTWVATG
AAVAVGSGTELTRQITSVAAGTQDTDAVNVAQLKKVSAVLNQAAAEAGKHSTVSAGDNIQ
VQNTAGAGEAANYQVSMKKDIAVDTITAQKAYVGDGTIAAGSKEAVNGGQIYGIQKEVEK
NTGDIRNLSGDVQNMSRSITKLDARVDRVGANAAALAALHPLDFDPDDKLDFAVGAGSYS
GANAVALGAFYRPNEDVMFSLGGSVGGGENMVNVGATFKLGQHNHVSNSRVAMAKELKDL
RKEVENLRGALADVAAGRKLDPTLTKLFPDVEKNHWAYNEIAQLYGNGIMEGYPDGEFKG
DRMMTRYEFAMIVYREMQKGARLSERILNEFEPELERIRVDTIAKDSKGNPTIQRVRVIK
GRG
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatcaatcaggcagtacggaagcagacggaaaagggccgtagggttgtgccg
gaacaggtggcagccggaccagagggaaaggggaaaaagctgcggagtgccgctttgacc
ctgctgatcctttcggctcttggcaattgcacctatgcggcagacactgcaacgggagcg
ggaaacggtgttgcatatggcacagggagcaatgcccccaaagctgagaatgtggccatt
gggaagggggcggggatttcctattccaatggcgccagcaatgccaccggggatattgtg
gtgggcaatggagccaacatcaacaactatgccagccaggggggcagcatcgccatcggc
aaaaatgccaaagtggaaaacatggccggcggaggggaagccagttttgccttcgggcag
accacctacagcggcagctggttctcttccccacggatccctgctgaccctacaaaagtc
gtcggcagtatcgccatcggggacaatacctttgcccgtaccggcagtaccatgatcggg
tcccacaattacaagggagagctgggagataccacggtggacagtgcttccacccggact
gatgccctgaacgtttatgccaccaccatcggggccaacagcttcagcaatggggcgttc
accaccagtaccggtgtgtacaacatcatttccagtgagtataacggtgggcggctggcc
aatccggtaaagaacctgggggccaccatcaacggagccctgaacagcattgaatccaaa
acgggaagctattactcagggattgccaataccatcagcggggtggccaaccgggctttc
aattccaacggggccctgatttacggggcggggaatgaaatcaccaattcggtaacaagt
ctgagtggtgtcccttcagacagcggagcttccgccaaagaatttgcggaaaaactgagg
accgccattgccgcttctgacagcggcggcgccaccctggccatcggtggtgggaacaag
gcagattacaccgagaagacggctatcatcggggtgggaaaccaggtgaccggggccagc
gcagccgtcagcagccacaatatggtatccggatacaagaataccgcttccaatgtccag
catgtgtccgtaatcgggtccggcaatacggtgaaagatacgaatacggcgttgctgctg
ggggacaaaaggactttgtccggggccaccaacagcgttgtgctggggtcagcagataat
atgaccaccacggaccagaagaatgtggtgatcctggggcacaatgccaacgctactgca
gaagggggagtggccctgggaagcggttccctggcatcggtgggagccggggaagccggc
tatgatccctccaccaaacaggcttccacggatacctcctccacctgggtggcgacggga
gccgcagtggccgtgggcagcggaacggagctgacccggcagatcaccagtgtggccgcc
gggacccaggatacggatgccgtcaatgtggcccagttgaaaaaagtcagcgcggtactg
aaccaggcagcagcagaagcagggaaacattccactgtttcggcaggggacaatatccag
gtgcagaatactgcgggtgccggagaagcagccaattatcaggtgtcgatgaaaaaagac
attgccgtggacaccattactgcccagaaagcgtatgtgggagatgggaccattgcagca
ggttccaaagaagctgtcaatgggggccagatctatggcatccagaaagaggtggagaaa
aacacgggagatatcaggaatctttctggagatgtccagaacatgagccgttccatcacc
aaactggatgcccgggtggaccgggtgggggccaatgcggcagccctggcggctctccat
cctctggatttcgatccggatgacaaactggactttgcggtgggggccggcagctacagc
ggggccaatgccgtggccctgggggccttctaccggcccaatgaggatgtgatgttcagc
ctgggcggcagcgtgggcggcggagaaaacatggtgaatgtgggtgccaccttcaaactg
ggtcagcacaaccatgtgtccaacagccgggtggccatggccaaggaactgaaagatctg
cggaaggaagtggaaaacctccggggcgccctggccgatgtggccgccggacggaagctg
gatcccactctgaccaaactgttcccggatgtggaaaagaaccactgggcctacaacgaa
atcgcccagctctacgggaacggcatcatggaagggtatccggatggagaattcaaaggc
gaccggatgatgacccggtatgaattcgccatgatcgtctatcgggaaatgcagaaaggc
gcccggctcagcgaacggatcctcaacgaattcgaaccggaactggaacggatccgggtg
gataccattgccaaagacagcaaagggaatcccaccatccagcgggtacgggtgatcaaa
ggaagaggataa
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