Acidaminococcus fermentans: Acfer_1995
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Entry
Acfer_1995 CDS
T01151
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
afn
Acidaminococcus fermentans
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA
GAF_2
GAF
Mg_chelatase
AAA_2
AAA_19
PAS_8
AAA_16
AAA_3
AAA_22
AAA_7
SpoVT_C
PAS_4
nSTAND3
HTH_50
DUF2059
AAA_14
PAS_7
Motif
Other DBs
NCBI-ProteinID:
ADB48343
UniProt:
D2RMP1
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Position
complement(2207898..2209688)
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AA seq
596 aa
AA seq
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MEKAGDEIRSRLRNIQRTVASYAGIISKIAGVDVEVVDDNLYRVAGTGMFAAGVDASMAQ
EGHVYRKVLETGKRRVIYQPGEELVCQGCPNFLNCPEEIELAMPILAEGHPIGVIGLVGS
SREQKLHILENETLFLELIEQIADFISVKAMERERALQREALLSTLNATLEHIQQGILIL
GKDFRVTDCNRAAMEQLETPNLAGERIFLEATGDNLAKYTEYSLTALGRQYRLMGTYLPV
PQPTRDYQSVLIFYRSREIKERYFETAALPAVDKTSILGSSPATLKLKEEISKVARSTST
VLITGESGTGKEMVATSIWRESDRRDKRFIALNCAAIPESIMESELFGYVKGAFTGADPN
GRMGKFELTNEGVIFLDEIGDMPLYLQSKLLRVLQERKIVRIGSNQLMDIDVRVIAATNK
DLKKMVREKRFREDLYYRLDVIPLRVAPLRERLEDIEDLTLFYSQRFARKFGKKAPRLTE
EVMDALKGYRWPGNVRELENAVEYMVNLMGEDGTLDVSMLPEDIRTGSREAAAPTENGPG
KQTGAGQILSLRELEKNAIRQALLQCGNHTAGKAMAARKLGIGMATLYRKIQQYGL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcaggggacgaaatccggtccaggctccggaacatccagcggacggtggct
tcttacgcggggatcatttcgaaaatcgccggggtggatgtggaagtggtggacgacaac
ctgtaccgggtcgccgggaccggcatgttcgcggcaggggtggatgccagtatggcccag
gaaggccatgtgtaccggaaggtactggaaaccgggaaacgcagggtcatttaccagccc
ggggaagaactggtctgccagggctgtcccaattttctcaactgtccggaagaaatcgaa
ctggccatgccgatcctggcggaaggccatcccatcggggtcatcggcctggtgggaagc
agccgggaacagaaactgcatatcctggaaaatgaaacgctgttcctggaactgatcgaa
cagattgccgacttcatttccgtcaaagccatggagcgggaacgggctcttcagcgggaa
gcactgctgagcaccctgaatgccaccctggagcatatccagcagggaatcctgatcctg
gggaaggattttcgggtgacggattgcaaccgggctgccatggaacaactggaaacgccc
aacctggccggcgagcggatttttctggaagccaccggggataatctggccaaatatacg
gaatacagcctgacggccctgggacggcagtaccggctcatggggacctatctgccggtg
ccgcagccaacccgggattaccagagcgtcctgattttttaccgcagcagggaaatcaaa
gagcggtattttgaaacagcagcactgccggcggtggacaaaaccagcattctgggctcc
agtccggctaccctgaaactgaaggaagaaatcagcaaggtggcccgcagtacctctacg
gtgctgatcaccggcgaaagcggtaccgggaaggaaatggtggccacgtccatctggcgg
gaaagcgaccggcgggacaagcggttcattgccctgaactgtgcggccatcccggaatcc
attatggaaagtgaattgttcggctatgtgaagggggcctttaccggagcggatcccaat
ggacggatgggaaaattcgaactgaccaatgaaggggtcatcttcctggatgaaatcggg
gacatgcccctgtatctccagtccaaactgctgcgggtgctccaggaacggaagattgta
cggatcggatccaatcagctgatggatatcgatgtgcgggtcattgcggccaccaacaag
gatctgaagaaaatggtccgggagaagcggttccgggaagacctgtactatcgtctggat
gtgatccctttgcgggtggctcctctgcgggaacggttggaagatatcgaagatctgacc
cttttctacagtcagcggtttgcccggaaattcgggaaaaaggcacctcgtctcacggaa
gaggtcatggatgccctgaaggggtaccggtggccggggaatgtccgggaactggaaaat
gcggtggaatacatggtgaatctcatgggcgaggatgggacgctggatgtctccatgctg
ccggaagatatccgtaccgggagccgggaagcagcggcgccgacagaaaatggtcctgga
aaacaaaccggggcgggacagatcctttctctgcgggaattggaaaagaatgccatccgg
caggcccttctccaatgcgggaaccatacggccgggaaagccatggcggccaggaaactg
ggtatcgggatggcaaccctgtaccggaagatccagcagtacggactgtaa
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