Acidimicrobium ferrooxidans: Afer_1324
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Entry
Afer_1324 CDS
T00956
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo01502
Vancomycin resistance
afo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Afer_1324
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Afer_1324
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afo01002
]
Afer_1324
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afo01011
]
Afer_1324
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
afo01504
]
Afer_1324
Enzymes [BR:
afo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
Afer_1324
Peptidases and inhibitors [BR:
afo01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Afer_1324
Peptidoglycan biosynthesis and degradation proteins [BR:
afo01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Afer_1324
Antimicrobial resistance genes [BR:
afo01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Afer_1324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M15
VanY
DUF2478
Motif
Other DBs
NCBI-ProteinID:
ACU54250
UniProt:
C7LZU2
LinkDB
All DBs
Position
complement(1377379..1378044)
Genome browser
AA seq
221 aa
AA seq
DB search
MSLVPPGVVLIGDQAVQQVPVSECGEPLVDLGERDLIVIDDRLDDGTGNHRFVREGLAER
LVRAARALPEGLRLAVVEGFRSRELQRRYFEEYYAELLEANRGADPERTRLLASRYVAPP
DGFPPHCCGAAVDLTLVGADGAEVDMGSAVNASPEESAGRCFFDAETIGREARRMRSVLR
SVLVAVGLVNYPTEWWHWSWGDQYWGLMTGAGEARYGVIDR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtgccacctggtgtggtcttgatcggcgaccaggcggtgcagcaagttccc
gtcagtgagtgcggcgagccgctggtggacctcggcgagcgcgatctcatcgtgatcgac
gatcggctcgacgatgggaccggcaaccatcggttcgtgcgcgagggattggcggagcgc
ctggtgcgtgcggcgcgtgcactgcccgagggactgcgcctcgcggtcgtcgaaggcttc
cggtcccgcgagctgcagcggcgctacttcgaggagtactacgcagagctcctggaggcg
aatcggggagcagatcccgagcggactcgtctgctggcgagccgctatgtagcgcctccg
gacggattcccgccgcattgctgcggggcggctgtcgacctgacgctcgtcggagccgac
ggcgcggaagtggacatgggatcggcggtgaacgcgagtccggaggagagcgcaggtcga
tgcttcttcgacgccgagaccattggccgagaggcacgacgcatgcggagcgtgctgcgc
tcggtgctcgtggcggtggggctcgtcaactacccgacggagtggtggcactggtcgtgg
ggggatcagtactggggactcatgaccggtgcgggtgaggctcgctacggcgtgatcgac
cgctga
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